Pairwise Alignments

Query, 527 a.a., signal transduction histidine-protein kinase/phosphatase UhpB from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., sensor histidine kinase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 46/323 (14%)

Query: 200 LGLLAELTLLEQMKPFALLIILLPTIFLAYRYG-------WQGGVLASSLNCILLATARQ 252
           + +L   T++  + P ++ +    + F+ + Y        W G V+       LL    Q
Sbjct: 67  IAMLVLATVVTPINPGSISLFTFASFFIGFFYPIRVSVFCWFGVVVL----LFLLNYLNQ 122

Query: 253 FSGSFSSDQELLIFMSSQAFVGLGLGIAISRQHQLALLLQKMNTRLAKELREKQDLARQL 312
           F+  +      L+ +     VG+ LG+A  R++   L          KE +  Q+++   
Sbjct: 123 FNNLYFPLYGTLLVLG----VGM-LGVAERRRYHHKL----------KEQQSAQEISTLA 167

Query: 313 VSVEEQIRKSVARELHDEIGQNITAIQIQSMLAERLASNDQAKQAASSVQSLAMRIHQST 372
             VE   R+ +AR+LHD +G ++++I +++ LAE+L +  + + A + +Q L     Q  
Sbjct: 168 TMVE---RERIARDLHDIMGHSLSSIALKAELAEKLLAKQEYQLATTQLQELG----QIA 220

Query: 373 RQLLKQLRPHILD--ELGLEHAIRQLVQEMRFAEQGMTVRLNMGVNPQKLDDTTRVTLYR 430
           R+ L Q+R  + D    GL   I QL   +R  ++G+ V L +G  P KL       L  
Sbjct: 221 RESLSQIRHTVCDYKHKGLASCITQLCHSLR--DKGIYVEL-IGELP-KLPARAESQLGL 276

Query: 431 IVQELLNNICKHAKATRVHISL-FPGSEMVLEVKDDGIGLPTDWRVRGHGLKGLSERVSA 489
           I+ EL+NNI +H+ A++  I+     + + +EVKD+    P    + G+GL G+ ER+ +
Sbjct: 277 ILTELVNNILRHSSASQCSITFREQENTLFVEVKDNASASPF---IEGNGLTGIRERLDS 333

Query: 490 LGGQLKMTSSTFQTGTRIIVNLP 512
           LGG     S   + G    V+LP
Sbjct: 334 LGGHF---SYNLEQGYAFTVSLP 353