Pairwise Alignments

Query, 527 a.a., signal transduction histidine-protein kinase/phosphatase UhpB from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., MASE1 sensor histidine kinase from Klebsiella michiganensis M5al

 Score =  377 bits (968), Expect = e-109
 Identities = 222/524 (42%), Positives = 320/524 (61%), Gaps = 35/524 (6%)

Query: 8   IFAFVLYSISQFSLWNVSQYLSHNPLQAYLLFPTGLRLAVYLLAR----------PTYVW 57
           +F  + +      LW +  YL+HN  QA L  P G+ LA+ +L            P  + 
Sbjct: 12  LFIVLAWGSGWLMLWTLGFYLTHNGQQAALFLPHGVYLALLILLSRRYWPALALPPMLML 71

Query: 58  VWLLSDMLLAGVILVLLPDQSSPLMLLMPWVVWLAAVIARQHWPKLHLYWQKLLLIVALV 117
           +WL  + LL G +L+     ++PL+ L+P      A IA+Q W +  LYWQ+L L++A V
Sbjct: 72  LWLHGEQLLNGYLLL-----AAPLIGLLP------AGIAQQFWHRFPLYWQRLTLLLATV 120

Query: 118 LLHTILVGITFTLLAKPLHMGAETLIAVSIASLTGGIVLTPFLYLVADYLSHQ-TWHPLS 176
               +L     T L  P       ++   +AS TGG++LTPF+YL+ ++L  Q  +H L 
Sbjct: 121 TASALLN----TALLSPFVKSPAMMLG--LASFTGGVLLTPFVYLIFEFLRQQHRYHLLG 174

Query: 177 PQLIHHDVKLKPKMLMWSLLFFSLGLLAELTLLEQMKPFALLIILLPTIFLAYRYGWQGG 236
             L  ++  L+  +++W  LFF +G+  ++ L  +++   L+++ LP + +A+++GWQGG
Sbjct: 175 --LDTNNPPLRTSLIIWCSLFFIIGIGTQMVLSPEIERLLLIVVFLPNVVMAWKFGWQGG 232

Query: 237 VLASSLNCILLATARQFSGSFSSDQELLIFMSSQAFVGLGLGIAISRQHQLALLLQKMNT 296
           VL+  L  +++  ARQ    FS+  EL IF+++QA +G+GLGIAISRQ  LA  L     
Sbjct: 233 VLSGLLGSMMITIARQVGVGFSNLVELEIFLATQALLGIGLGIAISRQQHLAQNLHHYRQ 292

Query: 297 RLAKELREKQDLARQLVSVEEQIRKSVARELHDEIGQNITAIQIQSMLAERLASNDQAKQ 356
           RL  EL  ++ LA +L+  EE  RKS+ARELHDEIGQNITAIQIQS L +R     Q + 
Sbjct: 293 RLEAELAARRALAEKLIHTEEDTRKSLARELHDEIGQNITAIQIQSQLVKRARDPAQTQA 352

Query: 357 AASSVQSLAMRIHQSTRQLLKQLRPHILDELGLEHAIRQLVQEMRFAEQGMTVRLNMGVN 416
           AAS +  LA RIH STRQLL+QLRP  LDEL  + A+  L+ E  FAE+G+  R +  + 
Sbjct: 353 AASQINDLARRIHHSTRQLLRQLRPPALDELSFKEALHHLLNEFAFAERGIRCRFDYRLT 412

Query: 417 PQKLDDTTRVTLYRIVQELLNNICKHAKATRVHISLF-PGSEMVLEVKDDGIGLPTDWRV 475
                +T R TLYR++QELLNN+CKHA A+ V I+LF  G+ + LEVKD+GIGL  D ++
Sbjct: 413 ATPESETVRFTLYRLLQELLNNVCKHADASEVAIALFQQGALLRLEVKDNGIGLRAD-QM 471

Query: 476 RGHGLKGLSERVSALGGQLKMTSSTFQTGTRIIVNLPTKRSITS 519
            G G++G+ ERVSALGG+L + S   Q GTR+IVNLPT    T+
Sbjct: 472 AGFGIQGMRERVSALGGELTLES---QRGTRVIVNLPTNLQQTA 512