Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., DNA-binding response regulator, LuxR family, near polyamine transporter from Pseudomonas fluorescens FW300-N2E2

 Score =  146 bits (369), Expect = 2e-40
 Identities = 80/209 (38%), Positives = 126/209 (60%), Gaps = 4/209 (1%)

Query: 1   MITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60
           +I + + +DHTIVR G  QL+ L +D+ V GE  + +     L     +V ++DISMP  
Sbjct: 1   VIRVLVAEDHTIVREGIKQLIGLAKDLVVVGEASNGEQLLETLRHVPCEVVLLDISMPGV 60

Query: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120
           NGL  + R+R  N     ++LS++D A    +AL  GA GY +K   P+ L+ AIR VA+
Sbjct: 61  NGLEAIPRIRALNNPPAILVLSMHDEAQMAARALKVGAAGYATKDSDPALLLMAIRKVAA 120

Query: 121 GRRYL---CADALV-NLSNPDINNVLADLTKREVEVFDLLVQGKEVKEIAQTLFLSHKTV 176
           G RY+    AD +V  +   D   + + L++RE  VF+ L QG  V +IAQ L LS KT+
Sbjct: 121 GGRYIDPDLADRMVFEVGLTDTRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTI 180

Query: 177 HVHRANILSKLNLTNNVDVIRFALQHQLL 205
             H+A ++ KLN+T+  +++++A++H+LL
Sbjct: 181 STHKARLMQKLNITSLAELVKYAMEHKLL 209