Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., DNA-binding response regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

 Score =  114 bits (285), Expect = 1e-30
 Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 5/209 (2%)

Query: 1   MITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60
           M ++ +VDDH ++R     LL  E   +V GE ++   A   + +   D+ I+DIS+P  
Sbjct: 1   MNSVFIVDDHPVIRLAVRMLLEHE-GYKVVGETDNGVDAMQMVRECMPDLVILDISIPKL 59

Query: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120
           +GL +L R        K ++L+      F  + + +GA GY+ K+   SELVSAI+ V S
Sbjct: 60  DGLEILSRFNAMTTPLKTLVLTAQSPTLFGIRCMQSGASGYVCKQEDLSELVSAIKAVLS 119

Query: 121 GRRYLCADALVNLSNPDINNVLADLTK----REVEVFDLLVQGKEVKEIAQTLFLSHKTV 176
           G  Y  + AL  +   D  ++  DL K    RE+ V  L  QG+  KEIA+ +FLS+KTV
Sbjct: 120 GYNYFPSQALNPVRPDDPRSIELDLFKSVNDRELMVLQLFAQGRTNKEIAKGMFLSNKTV 179

Query: 177 HVHRANILSKLNLTNNVDVIRFALQHQLL 205
             ++  ++ KL + + VD+I  A ++ L+
Sbjct: 180 STYKKRLMQKLKVKSLVDLIEMAKRNALV 208