Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., DNA-binding response regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

 Score =  120 bits (302), Expect = 1e-32
 Identities = 70/204 (34%), Positives = 114/204 (55%), Gaps = 6/204 (2%)

Query: 2   ITIALVDDHTIVRSGFAQLLN-LEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60
           + I LVDDH +VR G+A LL  L  D++V+ E  + + A   + +    + I+D  +P  
Sbjct: 1   MNILLVDDHAVVRQGYASLLRVLMPDLQVR-EAATGEEALSQVQEQVPHLVIMDFGLPGI 59

Query: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120
           +GL    RLRQ  P+ + +  S++D    V++ALDAGA GYL+K   P  LV A+R V +
Sbjct: 60  SGLETTRRLRQRLPQLRVLFFSMHDELPLVRQALDAGAAGYLTKNSAPQVLVDAVRRVLA 119

Query: 121 GRRY----LCADALVNLSNPDINNVLADLTKREVEVFDLLVQGKEVKEIAQTLFLSHKTV 176
           G  Y    L        S  D++  L  +T+RE+E+F +L +G   + IA+ L +S KTV
Sbjct: 120 GHVYIEQSLATQLACTRSRQDVDPRLQCMTQRELEIFVMLAKGTPARTIAEQLCISAKTV 179

Query: 177 HVHRANILSKLNLTNNVDVIRFAL 200
             H   + SKL ++++ +++   +
Sbjct: 180 SNHLTLLKSKLQVSSHAELVHLGI 203