Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  144 bits (364), Expect = 9e-40
 Identities = 82/209 (39%), Positives = 124/209 (59%), Gaps = 4/209 (1%)

Query: 1   MITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60
           MI + + +DHTIVR G  QL+ + +D++V GE  S +     L Q   DV ++DISMP  
Sbjct: 1   MIRVMVAEDHTIVREGIKQLIGMARDMQVVGEAASGQQLLDQLRQISCDVVLLDISMPGV 60

Query: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120
           NGL  + R+R  N     ++LS++D A    +AL  GA GY +K   P+ L++A+R VA 
Sbjct: 61  NGLEAIPRIRALNQPPAVLVLSMHDEAQMAARALKIGAAGYATKDSEPALLLTALRKVAG 120

Query: 121 GRRYL---CADALV-NLSNPDINNVLADLTKREVEVFDLLVQGKEVKEIAQTLFLSHKTV 176
           G RY+    AD +V  +   D     A L++RE  VF+ LVQG  V +IA  L LS KT+
Sbjct: 121 GGRYIDPALADRMVFEVGLTDSRPPHALLSEREYSVFERLVQGDSVNDIAGKLALSSKTI 180

Query: 177 HVHRANILSKLNLTNNVDVIRFALQHQLL 205
             H+A ++ KL   +  D++R+A++H+L+
Sbjct: 181 STHKARLMQKLAAHSVADLVRYAMEHKLV 209