Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  117 bits (293), Expect = 2e-31
 Identities = 66/210 (31%), Positives = 119/210 (56%), Gaps = 5/210 (2%)

Query: 1   MITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60
           MI + +VDDH +VR+G +++L     ++V G+ +S + A     + + DV ++D+ MP  
Sbjct: 1   MIRVLVVDDHDLVRTGISRMLADISGLQVIGQADSGEDAIRKARELKPDVVLMDVKMPGI 60

Query: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120
            GL    +L +  P  K I ++I +   F  + L AGA GYL+K  G  E+V AIR V  
Sbjct: 61  GGLEATRKLLRSYPDLKVIAVTICEEDPFPTRLLQAGAAGYLTKGAGLEEMVQAIRMVFG 120

Query: 121 GRRYLCADALVNLSNPDINNVLAD-----LTKREVEVFDLLVQGKEVKEIAQTLFLSHKT 175
           G+RY+       L+       L++     L++RE+++  ++   ++V+ I+  L LS KT
Sbjct: 121 GQRYISPQIAQQLALKSFQPQLSESPFDLLSEREIQIALMIANCQKVQSISDKLCLSPKT 180

Query: 176 VHVHRANILSKLNLTNNVDVIRFALQHQLL 205
           V+ +R  I  KL++T++V++   A++H ++
Sbjct: 181 VNTYRYRIFEKLSITSDVELALLAVRHGMV 210