Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., response regulator (RefSeq) from Shewanella loihica PV-4

 Score =  133 bits (335), Expect = 2e-36
 Identities = 70/212 (33%), Positives = 126/212 (59%), Gaps = 4/212 (1%)

Query: 1   MITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60
           +I++ LVDDH +VR+G  ++L  E+ I+V GE    ++A       E DV ++D++MP  
Sbjct: 16  LISVFLVDDHELVRTGIRRILEDERGIKVVGEAGDGESAVQWCRNNEADVILMDMNMPGI 75

Query: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120
            GL    ++ ++    K I+L+I+    F  K + AGA GYL+K   P E++ AIR VA 
Sbjct: 76  GGLEATRKILRYQSHAKIIVLTIHTEDPFPTKVMQAGASGYLTKGATPPEVIQAIRQVAH 135

Query: 121 GRRYLCADALVNLS----NPDINNVLADLTKREVEVFDLLVQGKEVKEIAQTLFLSHKTV 176
           G+RYL  +    ++    N   +N    L++RE+++  ++  G+ V +I++ L LS KTV
Sbjct: 136 GQRYLSPEIAQQMALSQFNQSEDNPFKSLSERELQIMMMITNGERVSDISEQLNLSPKTV 195

Query: 177 HVHRANILSKLNLTNNVDVIRFALQHQLLVEG 208
           + +R  + +KL ++ +V++ R A+++++L  G
Sbjct: 196 NSYRYRLFAKLGISGDVELTRLAIRYKMLDTG 227