Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Dechlorosoma suillum PS

 Score =  143 bits (361), Expect = 2e-39
 Identities = 80/207 (38%), Positives = 119/207 (57%), Gaps = 4/207 (1%)

Query: 1   MITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60
           MI I L DDH+IVRSG  QLL  E D+ V GE          L Q  +D+ ++D+SMP  
Sbjct: 1   MIRILLADDHSIVRSGLKQLLATEADLEVAGEASQGSEVLTRLRQGGIDLLLMDMSMPGI 60

Query: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120
           +GL L+ R     P    ++LS+++ +  V +AL AGA GY++K   P+ L++AIR VA 
Sbjct: 61  SGLDLIRRAHTEAPEVPVVVLSMHNESQLVSRALRAGASGYVTKDSDPAILLAAIRKVAR 120

Query: 121 GRRYL---CADALVNLSNPDINNVLADLTKREVEVFDLLVQGKEVKEIAQTLFLSHKTVH 177
           G R++     DA+V    P+       L+ RE EV  LL QG  +  + + L +S KTV 
Sbjct: 121 GGRFIDPALVDAMV-FGAPEEAPPHEALSDREFEVLQLLSQGLALAAVGERLHVSAKTVS 179

Query: 178 VHRANILSKLNLTNNVDVIRFALQHQL 204
            H+  ++ KL + NN +++R+AL+H L
Sbjct: 180 THKTRLMQKLGIDNNAELVRYALRHGL 206