Pairwise Alignments

Query, 431 a.a., HDIG domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., Response regulator containing a CheY-like receiver domain and an HD-GYP domain from Pseudomonas stutzeri RCH2

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 5/154 (3%)

Query: 237 SIAMLMANVVDAKSQFTFQHSQKVAELCQHLAKELGLNVEMQKALYLTGLVHDIGKLHTP 296
           S+   ++     K   T QH  ++ E    +A  LG   E  + + L   +HD+GK+  P
Sbjct: 158 SVICSLSRAAQYKDDETGQHIIRIGESAALIAAALGQPAEWVERIRLAAPMHDVGKIGIP 217

Query: 297 EEILHKPGKLNESEYLCIQRHSTDSRYTLQMVFGQSVVCEWAGN----HHERLDGSGYPR 352
           + IL KPG L + E   +QRH T   + +     +S + E A      HHER DG+GYP 
Sbjct: 218 DHILLKPGTLTDLERKIMQRH-TQIGHAILRDGEESPLLEMAAEIALYHHERWDGTGYPH 276

Query: 353 GLQGAAIDLPSRIIAIADVFQALTQARPYRGSMS 386
           GL+G  I L +R++A+ DV+ AL   RPY+ S S
Sbjct: 277 GLKGEEIPLAARVVALCDVYDALRSPRPYKESWS 310



 Score = 32.0 bits (71), Expect = 3e-05
 Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 11/103 (10%)

Query: 33  DSVGVDDINHGHRVGYMAYSCAQAMEWSEEECQLVFALGLIHDCGVAQKRDFYRL----L 88
           D  G   I  G     +A +  Q  EW E     +     +HD G     D   L    L
Sbjct: 172 DETGQHIIRIGESAALIAAALGQPAEWVER----IRLAAPMHDVGKIGIPDHILLKPGTL 227

Query: 89  ENMQPDNTQQHCVRGNELLSN---CPPLAPFADAILYHHTPWD 128
            +++    Q+H   G+ +L +    P L   A+  LYHH  WD
Sbjct: 228 TDLERKIMQRHTQIGHAILRDGEESPLLEMAAEIALYHHERWD 270