Pairwise Alignments

Query, 431 a.a., HDIG domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., HD domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 98.6 bits (244), Expect = 3e-25
 Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 15/225 (6%)

Query: 189 RDLVRTMQHLLSKEFIWFSMEHHHIEAMGHNLPSTPFFEQKLGVEEIMSIAMLMANVVDA 248
           +DL+R +   LS+ F   ++E    EA+  ++  +   ++          A+   + +  
Sbjct: 105 KDLIRKV---LSETFEGKAIEVAPFEALADSMIESVLLDED---------ALKCMSALRT 152

Query: 249 KSQFTFQHSQKVAELCQHLAKELGLNVEMQKALYLTGLVHDIGKLHTPEEILHKPGKLNE 308
           K  +  +HS  VA L     K L L+  M + + + G++HDIGK+    ++LHKPGKL  
Sbjct: 153 KDAYLLEHSVNVAFLLVTFGKYLKLDRSMLREMAVGGILHDIGKIKVDNKVLHKPGKLTP 212

Query: 309 SEYLCIQRHSTDSRYTLQMVFGQSVVC-EWAGNHHERLDGSGYPRGLQGAAIDLPSRIIA 367
            E+  ++ H   +   +    G S +  +    HHE+LDG GYPRGL+G  I L  R+  
Sbjct: 213 EEFEHMKLHQVYALEIMSETKGLSQISKDVCLMHHEKLDGRGYPRGLKGDEIPLHGRMSC 272

Query: 368 IADVFQALTQARPYRGSMSLNEVMNIMRHEVSCGRLDSQ-VFDVI 411
           I D+F ALT  R Y+ +MS      I+   ++   LD Q V+D I
Sbjct: 273 IVDIFDALTATRCYKEAMSPAAAFKILL-SLTPFHLDQQLVYDFI 316