Pairwise Alignments

Query, 431 a.a., HDIG domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., HDIG domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  379 bits (973), Expect = e-109
 Identities = 185/410 (45%), Positives = 267/410 (65%)

Query: 19  VNLRQAFFCIARALDSVGVDDINHGHRVGYMAYSCAQAMEWSEEECQLVFALGLIHDCGV 78
           +++R A   +A ALD VGVDD++HGHRV YMAY CA  + W +E+ Q  +  GLIHDCGV
Sbjct: 13  MDVRHALLAVATALDFVGVDDLHHGHRVAYMAYECASVLGWPDEKKQFAYFAGLIHDCGV 72

Query: 79  AQKRDFYRLLENMQPDNTQQHCVRGNELLSNCPPLAPFADAILYHHTPWDELKNIAISDR 138
           +   +  RLL+ MQP++   H  RG E L  CP L  FA  +LYHHTPW EL++  +S  
Sbjct: 73  SSSEEHLRLLKLMQPEDAHCHSKRGYEALLECPILDVFAPIVLYHHTPWLELQSHDLSVF 132

Query: 139 NKRFAALIFLADRVDYLKELYPRDEYGNVTQEARNQVCLEIGRLSGSLFERDLVRTMQHL 198
            +  AALIFLADR D+L+  Y    +  +     + V   +    G+LFE ++V  M  L
Sbjct: 133 ERDIAALIFLADRTDFLRARYTHGCHEELITLHESMVAENLLAHCGTLFEPEMVNAMCQL 192

Query: 199 LSKEFIWFSMEHHHIEAMGHNLPSTPFFEQKLGVEEIMSIAMLMANVVDAKSQFTFQHSQ 258
           + K+  W++M+  HIE +G    +  F++++L +  +  +A  +A +VDAKS FTF HS+
Sbjct: 193 VKKDGFWYNMDATHIELLGLEFKANHFYDKELDIGGVKQLARFLARIVDAKSPFTFHHSE 252

Query: 259 KVAELCQHLAKELGLNVEMQKALYLTGLVHDIGKLHTPEEILHKPGKLNESEYLCIQRHS 318
           KVA L + +AK+ G++    + LY+ GL+HD+GKL TP+ +LHK GKL + EY  ++RH+
Sbjct: 253 KVALLAKLVAKDCGISDTDAELLYVAGLLHDVGKLKTPDLLLHKEGKLTKEEYSIVKRHT 312

Query: 319 TDSRYTLQMVFGQSVVCEWAGNHHERLDGSGYPRGLQGAAIDLPSRIIAIADVFQALTQA 378
            D+ +TL   F +SV+ EWA NHHERLDGSGYP   +   +DLPSRI+A+ DVFQALTQ 
Sbjct: 313 VDTEHTLHRFFPKSVIGEWASNHHERLDGSGYPFSKRQEQLDLPSRILAVVDVFQALTQK 372

Query: 379 RPYRGSMSLNEVMNIMRHEVSCGRLDSQVFDVIVRNSQQYYQLSIAESPT 428
           RPYRGS+SL+E+ +IM+  V  G+LD+ V+ +++ +   +Y LS  E  T
Sbjct: 373 RPYRGSLSLSEIYDIMQPMVDKGQLDAGVYSILLADIDNFYHLSTQEFQT 422