Pairwise Alignments

Query, 431 a.a., HDIG domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., HD domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 78.2 bits (191), Expect = 5e-19
 Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 8/159 (5%)

Query: 273 LNVEMQKALYLTGLVHDIGKLHTPEEILHKPGKLNESEYLCIQRHSTDSRYTLQMVFGQS 332
           L+ +  + + L+ ++HDIGK+   + IL KPG+L   E+  I+ H       L  +   +
Sbjct: 249 LDEDFIQDISLSAILHDIGKVGIADAILLKPGRLTPEEFEQIKAHPVIGGQVLASLLEYA 308

Query: 333 VVCEW-------AGNHHERLDGSGYPRGLQGAAIDLPSRIIAIADVFQALTQARPYRGSM 385
             C +       A  HHE+ DGSGYP GL+   I L +RI+A+ DV+ ALT  R Y+   
Sbjct: 309 PRCTFITMGRDIASGHHEKWDGSGYPLGLKEENIPLSARIVALVDVYDALTSPRCYKRPF 368

Query: 386 SLNEVMNIMRHEVSCGRLDSQVFDVIVRNSQQYYQLSIA 424
           S  E + ++  E      D  + D  ++   ++  LS A
Sbjct: 369 SHEEALALIL-EGRAKHFDPALVDCFMQIHTEFEVLSKA 406