Pairwise Alignments

Query, 431 a.a., HDIG domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 964 a.a., HAMP domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 76.6 bits (187), Expect = 3e-18
 Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 11/150 (7%)

Query: 286 LVHDIGKLHTPEEILHKP-GKLNESEYLCIQRHSTDSRYTL-QMVFGQSV--VCEWAGNH 341
           +++D G+LH     L  P G L   E   I  H   +   L ++ F   +  V E AG H
Sbjct: 806 VLYDRGELHN----LSIPWGTLTSEERYKINEHIIQTIMMLSELPFPAHLENVPEIAGGH 861

Query: 342 HERLDGSGYPRGLQGAAIDLPSRIIAIADVFQALTQA-RPYRGSMSLNEVMNIMRHEVSC 400
           HER+DG+GYPR ++G  +   +RI+A+AD+F+ALT   RPY+ + +L++ MNIM      
Sbjct: 862 HERMDGTGYPRRIKGELLHPLARIMAVADIFEALTAPDRPYKKAKTLSQAMNIMVGMAKS 921

Query: 401 GRLDSQVFDVIVRNSQQYYQLSIAESPTEW 430
           G +D ++  + +R  ++ Y+        EW
Sbjct: 922 GHIDRELLCIFIR--EEVYRAYAENHLPEW 949



 Score = 44.7 bits (104), Expect = 1e-08
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 16/114 (14%)

Query: 241 LMANVVDAKSQFTFQHSQKVAELCQHLAK-----------ELGLNVEMQKALYLTGLVHD 289
           L+A  +DAKS +T  H  +V  L + LA+             G+  E  + LYL   +HD
Sbjct: 586 LLAQAIDAKSPYTGGHCTRVPILSRLLAEAASDTRQGAYASFGMTNESWEELYLASWLHD 645

Query: 290 IGKLHTPEEILHKPGKLNESEYLCIQRHSTDSRYTLQMVFGQSVVCEWAGNHHE 343
            GK+ TPE ++ K  KL       I     + R   +++   + +  W G   E
Sbjct: 646 CGKVTTPEFVVDKATKLE-----TIHNRIHEIRTRFEVIKRDAHIAYWKGVSEE 694