Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 958 a.a., NAD-dependent formate dehydrogenase alpha subunit from Pseudomonas fluorescens FW300-N2E2

 Score =  140 bits (354), Expect = 3e-37
 Identities = 122/503 (24%), Positives = 207/503 (41%), Gaps = 53/503 (10%)

Query: 48  CRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMK 107
           C +CG GCS     +  ++V    D     N G +C+KG F        DR+  P++R  
Sbjct: 248 CAYCGVGCSFRAEMKGEQLVRMVPDKNGQANHGHSCVKGRFAWGYATHPDRITKPMIRK- 306

Query: 108 DGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKA 167
               H +  +  VSWD A    A + +      G  S+G   S + T  E Y   KL++ 
Sbjct: 307 ----HINDPWQEVSWDEAVTYAASELRRIQLKYGRDSIGGITSSRCTNEETYLVQKLVRT 362

Query: 168 GFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWT 227
            F +NN+D  AR C +    G  +T G       +D    AD  ++ G+N  + HPV  +
Sbjct: 363 AFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQNFDSVMKADVILVMGANPTDAHPVFGS 422

Query: 228 RITDRRLSHPHVKVNVLSTYYHRSFELADHGYI-------FHPQSDLAIANFIANYIIQN 280
           ++  +R      ++ V+     R  +L D  +          P +++A+ N + + I   
Sbjct: 423 QL--KRRLRQGARLIVIDP---RRIDLVDSPHARAELHLQLRPGTNVAMLNALGHVIATE 477

Query: 281 DAVNWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTV 340
             ++  FV+             +    D   Q +    NS DV                 
Sbjct: 478 GLIDQPFVDARCEAAD------FARWRDFVSQPE----NSPDV----------------- 510

Query: 341 EKASEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIA 400
                + GV  +++   A+ YA      +  + +G+ +H++G      + NL + TG I 
Sbjct: 511 --LGPVCGVPAEQIRAAARLYATGGNAAI-YYGLGVTEHSQGSTSVMGIANLAMATGNIG 567

Query: 401 TPGNSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPG 460
             G     L GQ +  G+  ++G+F H LP    V+N   RA  E+ W +   T+   PG
Sbjct: 568 REGVGVNPLRGQNNVQGSC-DMGSFPHELPGYRHVSNETVRAQFEQAWNV---TLQPDPG 623

Query: 461 FHAVQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQA 520
                      DG     + Q  +  Q+ P  N + +    +    ++V D +   TA+ 
Sbjct: 624 LRIPNMFEAALDGTFKALYCQGEDIAQSDP--NTQHVTAALSALECVIVQDIFLNETAKF 681

Query: 521 ADLVLPTAMWVEKEGAYGNAERR 543
           A + LP + ++EK+G + NAERR
Sbjct: 682 AHVFLPGSSFLEKDGTFTNAERR 704



 Score = 53.5 bits (127), Expect = 6e-11
 Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 3/138 (2%)

Query: 692 GKAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHE 751
           GK   + + Y    E  N  Y L L TGR+L  ++ G  TRR   +     D L  +H  
Sbjct: 791 GKGRFMLTGYVPTEEKVNSRYPLLLTTGRILSQYNVGAQTRRTDNVAWHEEDRL-EIHPT 849

Query: 752 DAQARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFFDARILVNKLILDATDP 811
           DA+ RG+   D V I +  G+  +R +   R  P  G+V+  F       N +  D +D 
Sbjct: 850 DAENRGIVDEDWVGIGSRAGQTVLRAKVTERVAP--GVVYTTFHFPESGANVITTDNSDW 907

Query: 812 LSKQTDFKKCPVKITKVA 829
            +   ++K   V+I +V+
Sbjct: 908 ATNCPEYKVTAVEIVRVS 925