Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., formate dehydrogenase, alpha subunit, archaeal-type from Pseudomonas stutzeri RCH2

 Score =  172 bits (435), Expect = 8e-47
 Identities = 141/518 (27%), Positives = 231/518 (44%), Gaps = 50/518 (9%)

Query: 48  CRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMK 107
           C FCG GC + +  + GRVV  +  P  PV+ G  C+KG+  S  +   +RL+TPL++  
Sbjct: 8   CTFCGVGCGLGLRVEGGRVVGVEPQPGHPVSAGQLCVKGWASSFAVDVGNRLRTPLIK-- 65

Query: 108 DGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKA 167
                + G F   SWD A  ++A +++A+L T GP+SVG+      T  + YAA K  +A
Sbjct: 66  -----EHGRFREASWDEALALVASEFRAALDTAGPSSVGVISCAHATNEDNYAAQKFARA 120

Query: 168 GFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWT 227
              + NID  AR C + +V G  R+ G         D + A+  ++ G+++ E H ++  
Sbjct: 121 VLGTANIDHCARICHSPSVAGLGRSLGSGAMTNSIADIDEAELILVIGADVTENHAMIGA 180

Query: 228 RITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDF 287
           R+   R      ++ V+     R   LAD        S++A+ N + + I  N   + DF
Sbjct: 181 RML--RAQARGARLIVVDPRRTRLARLADQHVQLRVGSNIALLNGLLHIIFANAWEDRDF 238

Query: 288 VNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKASEIS 347
           +                 R D+    +A                   V   T E  S  +
Sbjct: 239 L---------------ACRCDNEAALRA------------------HVRELTPELTSAQT 265

Query: 348 GVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPF 407
           GV    LI LA+ Y+    +    + MG+ Q   G      V NL L+ G++  PG    
Sbjct: 266 GVPVLALIELARAYSQAR-RAFIAYGMGITQFQSGTHNVIAVANLALVCGQLGRPGTGVN 324

Query: 408 SLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAVQQD 467
            L GQ +  G A ++G      P    VA+ + RA   + W + +   P  PG  ++   
Sbjct: 325 PLRGQNNVQG-ACDMGCLPDVYPGYQKVADAQVRAKFARAWGVAQ---PPAPGLTSLGMS 380

Query: 468 RMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQAADLVLPT 527
                G      V     +   P  ++ +L       +F+VV +   + TA+ AD+VLP 
Sbjct: 381 EAALRGEFRALLVLGEELVVTDP--DQHKLARALAALDFLVVVELTLSETARFADVVLPA 438

Query: 528 AMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVI 565
           A + EK+G + N ERR Q+ ++ V+  G++ +D WQ++
Sbjct: 439 ASFAEKDGTFSNCERRMQLLHKAVEPPGQARAD-WQIL 475



 Score = 75.1 bits (183), Expect = 1e-17
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 2/140 (1%)

Query: 690 PDGKAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMH 749
           P G+A +I      P E P+ +Y     T R+  H+  G MTR+ P L +  P  L F+H
Sbjct: 541 PRGRAQLIPVSQVEPDECPDADYPFCFTTQRLHFHYGGGAMTRKSPLLERETPAGLLFIH 600

Query: 750 HEDAQARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFFDARILVNKLILDAT 809
            +DA   GL     V +++ RG +  R      +  P G V +P+       N+L   A 
Sbjct: 601 PQDAARLGLAEAQGVRVASRRGALETRAHL--TDDVPPGTVAMPYHFREAPCNRLTNSAQ 658

Query: 810 DPLSKQTDFKKCPVKITKVA 829
           DP+S   + K C V +T +A
Sbjct: 659 DPISHMPELKACAVALTPLA 678