Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 834 a.a., periplasmic nitrate reductase, large subunit from Pseudomonas stutzeri RCH2

 Score = 1222 bits (3161), Expect = 0.0
 Identities = 575/832 (69%), Positives = 683/832 (82%), Gaps = 3/832 (0%)

Query: 1   MKMTRRAFVKANAAASAAAVAGITLPASATNLIASSDQTAIHWDKAPCRFCGTGCSVLVG 60
           M +TRR F KANAAA AA VAG+ + ++A+NL+  +D T + WDKAPCRFCGTGC V+V 
Sbjct: 1   MSLTRRQFAKANAAAIAATVAGMPIASTASNLVTEADATNLKWDKAPCRFCGTGCGVMVA 60

Query: 61  TQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKDGEFTPV 120
           T++GRVVAT GD +A VN+G+NC+KGYFLSKIMYG DRL  PLLRMKDG++ K GEF P+
Sbjct: 61  TREGRVVATHGDVKAEVNRGINCVKGYFLSKIMYGSDRLTQPLLRMKDGKFDKQGEFQPI 120

Query: 121 SWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKAGFRSNNIDPNARH 180
           +WD AFD+M EK+KA+LK  GP ++GMFGSGQWT+ EGYAA KLMKAGFRSNNIDPNARH
Sbjct: 121 TWDQAFDIMEEKYKAALKQGGPEAIGMFGSGQWTIWEGYAANKLMKAGFRSNNIDPNARH 180

Query: 181 CMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWTRITDRRLSHPHVK 240
           CMASA  GFMRTFG+DEPMGCY+D E ADAFVLWGSNMAEMHPVLWTR+TDRRLS P+VK
Sbjct: 181 CMASAAFGFMRTFGMDEPMGCYEDIEAADAFVLWGSNMAEMHPVLWTRVTDRRLSAPNVK 240

Query: 241 VNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDFVNKHTHFKQAVTD 300
           V V+ST+ HRSFELAD   IF+PQ+DL I N+IAN+IIQ+ AVN DF+ KHT F +  T+
Sbjct: 241 VAVMSTFEHRSFELADIPMIFNPQTDLVILNYIANHIIQSGAVNKDFIEKHTKFAKGATN 300

Query: 301 IGYGLRDDHPLQKKAKNANSGDV-SDISFEEYKKSVAPYTVEKASEISGVSPDKLITLAK 359
           IGYGLR   PL+ KA+NA   +  SDISFE+Y + +  YT+E A++ SGV  ++L  LA+
Sbjct: 301 IGYGLRPTDPLELKAENAAVANTWSDISFEDYAEFLKTYTLEYAAKESGVPAERLQALAE 360

Query: 360 QYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACGTA 419
            YADP  KVMS WTMG NQHTRGVW  +++YN+HLLTGKI+ PGNSPFSLTGQPSACGTA
Sbjct: 361 LYADPKVKVMSFWTMGFNQHTRGVWANNMIYNIHLLTGKISEPGNSPFSLTGQPSACGTA 420

Query: 420 REVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAVQQDRMLKDGVLNCYW 479
           REVGTF+HRLPADM VANPKHRAIAEK+WKLPEGTI EKPGFHAV+Q R LKDGVL  YW
Sbjct: 421 REVGTFSHRLPADMAVANPKHRAIAEKIWKLPEGTIQEKPGFHAVEQSRKLKDGVLKVYW 480

Query: 480 VQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQAADLVLPTAMWVEKEGAYGN 539
            Q  NNMQAGPN+ +E LPG+RNPE FI+VSD YPTV+AQAADL+LP+AMWVEKEGAYGN
Sbjct: 481 TQVTNNMQAGPNVMQEILPGWRNPETFIIVSDVYPTVSAQAADLILPSAMWVEKEGAYGN 540

Query: 540 AERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPEELLAKAPQYRGKTLYDVLFK 599
           AERRTQ W+Q V   GE+ SD WQ++EFSKRF V++VWP ELL+KAP+ +GKTLYDVLFK
Sbjct: 541 AERRTQFWHQLVTAPGEARSDLWQLVEFSKRFNVDEVWPAELLSKAPELKGKTLYDVLFK 600

Query: 600 NGQVDKFPLSEARE--LNDDAHHFGFYIQKGLFEEYAEFGRGHGHDLAPYDVYHQVRGLR 657
           NGQVDKFP  E  +   N +A  FGFY+QKGLFEEYAEFGRGH HDLA ++ YH+ RGLR
Sbjct: 601 NGQVDKFPSDEITKGYANQEAEAFGFYLQKGLFEEYAEFGRGHAHDLASFETYHETRGLR 660

Query: 658 WPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISSPYEAPPEMPNEEYDLWLC 717
           WPVVDGKET+WR++EG DPY +AGS   FYG  D KA I + PY+ P E+P+++Y  WL 
Sbjct: 661 WPVVDGKETQWRYREGYDPYVEAGSEVQFYGYGDKKAIIFALPYDVPAEVPDKDYPFWLS 720

Query: 718 TGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISNSRGEVRVRV 777
           TGRVLEHWHTG+MT+RV EL++AVPDAL +MH EDA+    RRG  V + + RGE++ R+
Sbjct: 721 TGRVLEHWHTGSMTQRVDELHQAVPDALVYMHPEDARKLNARRGSVVKVISRRGEMQARI 780

Query: 778 ETRGRNKPPKGLVFVPFFDARILVNKLILDATDPLSKQTDFKKCPVKITKVA 829
           ETRGRNKPP GLVFVPFFDA  L+NK+ LDATDP+SKQTD+KKC VKI  V+
Sbjct: 781 ETRGRNKPPMGLVFVPFFDANKLINKVTLDATDPISKQTDYKKCAVKIEVVS 832