Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 906 a.a., assimilatory nitrate reductase (NADH) alpha subunit apoprotein from Pseudomonas syringae pv. syringae B728a

 Score =  325 bits (834), Expect = 5e-93
 Identities = 234/785 (29%), Positives = 360/785 (45%), Gaps = 97/785 (12%)

Query: 48  CRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMK 107
           C +CG GC VL+      ++   GDP+ P N G  C KG  L      + R   P LR+ 
Sbjct: 16  CCYCGVGCGVLIEHDGEHILGVSGDPKHPANFGKLCSKGSSLHLTGDIEARALYPELRLS 75

Query: 108 DGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKA 167
            G        +   WDTA +  A  +  +++  GP SV  + SGQ    + YA  KL +A
Sbjct: 76  KGLAR-----SVTHWDTALEHAANVFAQTIREHGPDSVAFYISGQLLTEDYYAFNKLARA 130

Query: 168 GFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWT 227
              +NNID N+R CM+SAV G+ R+ G D P   Y+D E +D  ++ GSNMA  HP+L+ 
Sbjct: 131 LIGTNNIDSNSRLCMSSAVAGYKRSLGADAPPCSYEDIELSDCVMIVGSNMAYAHPILFR 190

Query: 228 RITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDF 287
           R+ + +   P +K+ V+      + ELAD      P +D+A+ + I + ++    ++  F
Sbjct: 191 RLEEAKNHRPQMKLIVIDPRRTDTCELADLHLAIQPGTDVALFHGILHILMSERLIDPAF 250

Query: 288 VNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKASEIS 347
           +  HT                                   +EE    V  Y  E  + + 
Sbjct: 251 IAAHTQ---------------------------------GYEELATLVHDYPPEHVAALC 277

Query: 348 GVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPF 407
           G++ ++L T A+   +     +SLW MG+NQ T G    S + NLHL TG+I  PG  PF
Sbjct: 278 GITLEQLHTCARWVGEAPA-FLSLWCMGLNQSTAGSAKNSALINLHLATGQIGKPGAGPF 336

Query: 408 SLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAVQQD 467
           SLTGQP+A G  RE G+ ++ LP     ANP+HR      W +   ++P  PG  A++  
Sbjct: 337 SLTGQPNAMG-GRETGSLSNLLPGHRDAANPQHRQEVADYWGV--DSLPASPGLSAIELF 393

Query: 468 RMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTV-TAQAADLVLP 526
             +++G +   W+ C N  Q+ P+ N  R      P  F+V+ +A+ T  TA+ ADL+LP
Sbjct: 394 EQMQNGTIKALWIACTNPAQSLPDQNRIRQALETCP--FVVLQEAFKTTETARYADLLLP 451

Query: 527 TAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPEELLAKAP 586
            A W EKEG   N+ERR     + ++  GE+ SD    ++F++R +      + L   AP
Sbjct: 452 AASWGEKEGTVTNSERRISNVRKAIQAPGEARSDWAITVDFAQRLQ------QRLQPDAP 505

Query: 587 QYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYAEFGRGHGHDLAP 646
                                             F F   K LF+E+     G   D++ 
Sbjct: 506 AL--------------------------------FDFATPKALFDEFKGLTVGRDLDMSG 533

Query: 647 YDVYHQVRGLRWPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISSPYEAPPE 706
            D        R  +      +W F  G+    +       +    G+A  +S PY A  E
Sbjct: 534 ID--------RELIDQQGPQQWPFPRGASSGTQRLYSEGIFPTDSGRAQFLSEPYIAARE 585

Query: 707 MPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLI 766
           + + +Y L L TGR+ + WH  + T     L+  V +A+  ++ +D  +  L+ GD V +
Sbjct: 586 LRDADYPLTLNTGRLRDQWHGMSRTGTAARLFGHVSEAVLSINPQDMLSHDLQPGDLVKL 645

Query: 767 SNSRGEVRVRVETRGRNKPPKGLVFVPF-FDARIL---VNKLILDATDPLSKQTDFKKCP 822
            + RGE+ + V +   +    G  FVP  +  R L   VN L   A DP+SKQ + K   
Sbjct: 646 ISRRGELLLPVSS--EDSVAVGQAFVPMHWGDRFLKGGVNVLTQPAFDPISKQPELKHAG 703

Query: 823 VKITK 827
           V+I K
Sbjct: 704 VRIEK 708