Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 729 a.a., assimilatory nitrate reductase (ferredoxin) precursor from Synechococcus elongatus PCC 7942

 Score =  304 bits (778), Expect = 1e-86
 Identities = 236/802 (29%), Positives = 352/802 (43%), Gaps = 122/802 (15%)

Query: 45  KAPCRFCGTGCSV--LVGTQDGRVVAT----------QGDPEAPVNKGLNCIKGYFLSKI 92
           K  C +CG GC +  +   Q GR              +GD + P ++G+ C+KG  +++ 
Sbjct: 20  KTLCPYCGVGCGLEAVPPAQPGRATVRDREGTPIWQIRGDRQHPSSQGMVCVKGATVAES 79

Query: 93  MYGQDRLKTPLLRMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQ 152
           +  + RLK P+ R        D  FT +SWD A D + ++ + +    G   +  +GSGQ
Sbjct: 80  V-SKSRLKYPMFRAS-----LDDPFTEISWDEALDRLCDRIQQTQADYGKDGICFYGSGQ 133

Query: 153 WTVMEGYAAVKLMKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFV 212
           +   + Y A KL+K    +NN D N+R CM+SAV  +    G D P  CY+D + AD  +
Sbjct: 134 FQTEDYYIAQKLVKGCLGTNNFDTNSRLCMSSAVSAYSLCLGSDGPPACYEDLDLADCLL 193

Query: 213 LWGSNMAEMHPVLWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANF 272
           + GSN AE HP+L+ R   R        + V+      + E+AD      P SD+A+ N 
Sbjct: 194 IVGSNTAECHPILFNRYRKRH-KQGGTNLIVVDPRCTPTAEVADLHLALKPGSDVALLNG 252

Query: 273 IANYIIQNDAVNWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYK 332
           +   + Q   V  DF+   T                                   FE++ 
Sbjct: 253 LGWLLYQMGYVKKDFIANQTE---------------------------------GFEDWL 279

Query: 333 KSVAPYTVEKASEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNL 392
             +  Y  ++ +E++G++  +L+  A   A    + +SLW+MG+NQ  +G    + + NL
Sbjct: 280 AIIEDYPPQRTAELTGLAVAELVRAADLIASAQ-RWLSLWSMGVNQSIQGTAKATSLINL 338

Query: 393 HLLTGKIATPGNSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPE 452
           HLLT +I  PG  PFSLTGQP+A G  RE G  AH LP    V +P+HRA  E +W LP 
Sbjct: 339 HLLTRQIGLPGCGPFSLTGQPNAMG-GRETGGLAHLLPGYRKVIDPQHRADVETIWGLPM 397

Query: 453 GTIPEKPGFHAVQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDA 512
           G+I  +PG  A Q    L+ G +   WV   N   + P++   +    R+P  F V+ DA
Sbjct: 398 GSISPQPGRTAWQMIEGLEQGAVGFLWVAATNPAVSLPDVKRAQAALKRSP--FTVLQDA 455

Query: 513 Y-PTVTAQAADLVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVI-EFSKR 570
           Y PT T   A L+LP A W EK G   N+ERR  +     +  GE+ +D WQ+  E  +R
Sbjct: 456 YHPTETTTYAHLLLPAAQWSEKTGTMTNSERRVTLCQAFRQPPGEARAD-WQIFAEVGRR 514

Query: 571 FKVEDVWPEELLAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLF 630
                                                L  A +  D A          +F
Sbjct: 515 -------------------------------------LGFAFDYTDAA---------AVF 528

Query: 631 EEYAEFGRGHGHDLA--PYDVYHQVRGLRWPVVDGKETKWRFKEGSDPYAKAGSGWDFYG 688
            EY +   G   DL+   +++  Q    +WP   G E      E    Y K       + 
Sbjct: 529 AEYVQVTAGRLCDLSGLSHELLAQAGPQQWPFPAGAEPT---TESKRLYTK-----HHFA 580

Query: 689 KPDGKAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFM 748
             DG+A      +    E P++ Y L L  GR+  HWHT T T R+ ++ K  P A   +
Sbjct: 581 YADGRARFQPFHHLGVAEPPDDRYPLVLTVGRLYGHWHTQTRTGRIDKINKLHPSAFVEI 640

Query: 749 HHEDAQARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVP-----FFDARILVNK 803
           H  DA    +  G  V+I + RGE     +      P  G++FVP      +  R   N 
Sbjct: 641 HPRDADRYNISEGQAVVIRSRRGEGCFPAKVTTAISP--GVLFVPMHWGALWGDRTEANA 698

Query: 804 LILDATDPLSKQTDFKKCPVKI 825
           L   A  P+S + + K C V+I
Sbjct: 699 LTHPAACPISGEPELKACAVQI 720