Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 885 a.a., Nitrate reductase (EC 1.7.99.4) (from data) from Sinorhizobium meliloti 1021

 Score =  302 bits (773), Expect = 6e-86
 Identities = 230/798 (28%), Positives = 354/798 (44%), Gaps = 117/798 (14%)

Query: 45  KAPCRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLL 104
           K  C +CG GC V+    D   V+ +GDPE P N G  C KG  L++ +    RL  P +
Sbjct: 6   KTTCPYCGVGCGVIARVGDDGAVSVKGDPEHPANFGRLCSKGSALAETLDLDGRLLHPEI 65

Query: 105 RMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKL 164
             +              W  A D++AE++  S+   GP SV  + SGQ    + Y A KL
Sbjct: 66  GGRRA-----------GWSEALDLVAERFSRSIAEHGPDSVAFYVSGQLLTEDYYIANKL 114

Query: 165 MKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPV 224
           MK    S NID N+R CM+S+V G  R FG D   G Y+D E A+  VL GSN+A  HPV
Sbjct: 115 MKGFIGSANIDTNSRLCMSSSVAGHRRAFGSDTVPGAYEDLELAELVVLTGSNLAWCHPV 174

Query: 225 LWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVN 284
           L+ R++  + + P +K+ V+      + ++AD      P  D+A+ N +  ++  + AV+
Sbjct: 175 LYQRLSAAKANRPEMKIVVIDPRRTMTADIADMHLAIAPDGDVALFNGLLAHLAASGAVD 234

Query: 285 WDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKAS 344
            ++++ +T                                   F+E   + +   +   S
Sbjct: 235 RNYISNYTS---------------------------------GFDEAVAAASRLDLPALS 261

Query: 345 EISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGN 404
             +G++  +L    + + +   KV++ ++ G+NQ   G    + + N HL TG+I  PG 
Sbjct: 262 TATGLTVAQLRAFFRLF-ETTEKVVTCYSQGVNQSAAGTDKVNAIINCHLATGRIGRPGM 320

Query: 405 SPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAV 464
            PFSLTGQP+A G  REVG  A+ L A M +    HR    + W  P  ++  KPG  AV
Sbjct: 321 GPFSLTGQPNAMG-GREVGGLANMLAAHMDIEKSLHRDQVRRFWGAP--SVASKPGLKAV 377

Query: 465 QQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSD-AYPTVTAQAADL 523
              R + DG +   W+   N + + P+ +         P  F+VVSD    T TA+ A +
Sbjct: 378 DMFRAVADGRIKALWIMATNPVVSMPDADAVEAAIKACP--FVVVSDIVRDTDTARHAHV 435

Query: 524 VLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVW----PE 579
           +LP+  W EK+G   N+ERR       +   GE+  D WQ+ E  +R      +    P 
Sbjct: 436 LLPSLGWGEKDGTVTNSERRISRQRPFLAAPGEARPDWWQLAEVGRRMGFAAAFTHGSPA 495

Query: 580 ELLAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYAEFGRG 639
            + A+     G       F+N     F +S   E++  A                     
Sbjct: 496 VIFAEHAALSG-------FENEGRRDFDISAHAEIDGPA--------------------- 527

Query: 640 HGHDLAPYDVYHQVRGLRWPVVDGK--ETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWII 697
                     Y  +R  +WP   G   + K  F EG+           FY  PDG+A ++
Sbjct: 528 ----------YDGLRPFQWPQPQGSAPQKKRFFAEGA-----------FY-HPDGRARLV 565

Query: 698 SSPYEAP-PEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQAR 756
           +   E P P   N+ +   L TGRV +HWHT T T +   L   + +    +H  DAQ  
Sbjct: 566 A--VEVPRPRSANDAFPFTLNTGRVRDHWHTMTRTGKSARLSGHLAEPFVEIHPRDAQGA 623

Query: 757 GLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPF-----FDARILVNKLILDATDP 811
           G+   D V + +  G   VR     R    +G +FVP      F ++  ++ L+   TDP
Sbjct: 624 GISDADLVTLESPHGAAIVRALVTDRQ--AEGNLFVPMHWNDQFASKARIDALVAPVTDP 681

Query: 812 LSKQTDFKKCPVKITKVA 829
           +S Q   K  PV+ ++ A
Sbjct: 682 VSGQPASKNMPVRASRFA 699