Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 991 a.a., putative formate dehydrogenase H from Phaeobacter inhibens DSM 17395

 Score =  128 bits (322), Expect = 1e-33
 Identities = 142/599 (23%), Positives = 239/599 (39%), Gaps = 81/599 (13%)

Query: 5   RRAFVKANAAA-----SAAAVAGITLPASATNLIASSDQTAIHWDKAPCRFCGTGCSVLV 59
           RRAF++ +  A     + +A  G    A+A    A + +T     K+ C  C  GC+V+ 
Sbjct: 29  RRAFLRGSGLAIGGLAAISATGGSVTKANAATAAAGAVETI----KSVCTHCSVGCTVVA 84

Query: 60  GTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKDGEFTP 119
             Q+G     +   ++P N G +C KG  + +  +G+ RLK P+   K+G     GE+  
Sbjct: 85  EVQNGVWTGQEPGWDSPFNLGAHCAKGASVREHAHGERRLKYPM--KKEG-----GEWKR 137

Query: 120 VSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKAGFRSNNIDPNAR 179
           +SW+ A + + +      +  GP SV   GS +    + Y   K   A + +NN+D  AR
Sbjct: 138 ISWEQAINEIGDGMMQIREESGPDSVYWLGSAKHNNEQAYLFRK-FAAYWGTNNVDHQAR 196

Query: 180 HCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWTRITDRRLSHPHV 239
            C ++ V G   T+G       Y+D  ++ A  + G N AE HPV    +   +    + 
Sbjct: 197 ICHSTTVAGVANTWGYGAMTNSYNDIHNSKAIFIIGGNPAEAHPVSLLHVLKAK-EQNNA 255

Query: 240 KVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDFVNKHTHFKQAVT 299
            + V    + R+   AD    F P +D+A+   I  +I  N   + +F+           
Sbjct: 256 PLIVCDPRFTRTAAHADEYVRFRPGTDVALVWGILWHIFDNSWEDKEFIRTRV------- 308

Query: 300 DIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKASEISGVSPDKLITLAK 359
              +G+                       ++ ++ VA +T E+   ++G    +L  +A+
Sbjct: 309 ---WGM-----------------------DQIREEVAKWTPEEVERVTGTPGSQLKRVAR 342

Query: 360 QYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACGTA 419
             A+ N     +W MG  QHT G         L L  G + T G       G  +  G A
Sbjct: 343 TLAN-NRPGTVIWCMGGTQHTTGNNNTRAYCILQLALGNMGTSGGGTNIFRGHDNVQG-A 400

Query: 420 REVGTFAHRLPADMVVANPKHRAIAEKVW----KLPEGTIPEKPGFHAVQQDRMLKDGVL 475
            ++G  +H LP    ++     A   +VW    +   G      G     +      G+ 
Sbjct: 401 TDLGVLSHTLPGYYGLSKGAW-AHWGRVWGEDGEWLAGQFDTIKGADGKDKSLQNLTGIP 459

Query: 476 NCYWV----QCNNNMQAGPNINEERLPGY------RNPE--------NFIVVSDAYPTVT 517
              W+    +  +NM    N+    L G+      R  E        + +VV D YPTV+
Sbjct: 460 VSRWIDGILEDKDNMDQPNNVRAMVLWGHAPNSQTRMTEMKTAMEKLDMLVVVDPYPTVS 519

Query: 518 AQAAD-----LVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRF 571
           A   D      +LP     E  G+   + R  Q   + V  + ES  D   + +F+ +F
Sbjct: 520 AVLHDRTDGVYLLPACTQFETRGSVTASNRSLQWRDKIVDPLFESLPDHVIIAKFANKF 578



 Score = 44.7 bits (104), Expect = 3e-08
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 709 NEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISN 768
           ++EY + L +GR++E+   G  TR  P L +   D    MH  DA   G+R G +V +  
Sbjct: 852 SKEYPIILTSGRLVEYEGGGEETRSNPWLAELQQDMFVEMHPRDANNIGIRDGSQVWVEG 911

Query: 769 SRGEVRVRVETRGRNKPPKGLVFVPF 794
             G  +V+V      +  +G+ F+PF
Sbjct: 912 PEGG-KVKVMAMVTERVGEGVAFMPF 936