Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 827 a.a., nitrate reductase (RefSeq) from Shewanella loihica PV-4

 Score = 1296 bits (3355), Expect = 0.0
 Identities = 607/828 (73%), Positives = 702/828 (84%), Gaps = 3/828 (0%)

Query: 1   MKMTRRAFVKANAAASAAAVAGITLPASATNLIASSDQTAIHWDKAPCRFCGTGCSVLVG 60
           M ++RR F+KANAA +AA   G+TLP         +D   I WDKAPCRFCG GCSVLVG
Sbjct: 1   MSISRREFLKANAAVAAATTVGVTLPVKIVEAAEQNDN--IKWDKAPCRFCGVGCSVLVG 58

Query: 61  TQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKDGEFTPV 120
           T +G+VVAT+GDPE+PVNKGLNCIKGYFLSKIMYG+DRL TPLLRMKDGQY K+GEFTPV
Sbjct: 59  TNNGKVVATKGDPESPVNKGLNCIKGYFLSKIMYGKDRLTTPLLRMKDGQYDKEGEFTPV 118

Query: 121 SWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKAGFRSNNIDPNARH 180
           SWD AFD MAEKWK +LKTKGPT+VGMFGSGQWTV EGYAA KL KAGF +NNIDPNARH
Sbjct: 119 SWDKAFDTMAEKWKNTLKTKGPTAVGMFGSGQWTVWEGYAASKLHKAGFLTNNIDPNARH 178

Query: 181 CMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWTRITDRRLSHPHVK 240
           CMASAV GFMRTFGIDEPMGCYDD E AD FVLWG+NMAEMHP+LW R++D RLS P+ +
Sbjct: 179 CMASAVGGFMRTFGIDEPMGCYDDLEAADQFVLWGANMAEMHPILWARLSDSRLSKPNSR 238

Query: 241 VNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDFVNKHTHFKQAVTD 300
           V+VLST+ +RSF+LAD+  +F PQSDL I NFIANYIIQN AVN +FV+KHT F    TD
Sbjct: 239 VHVLSTFENRSFDLADNPMVFRPQSDLVILNFIANYIIQNGAVNKEFVSKHTKFALGTTD 298

Query: 301 IGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKASEISGVSPDKLITLAKQ 360
           IGYGLR DHPL+KKAKN  +G  + ISF+EY K V+ YT+E A+++SGV P+KL TLAK 
Sbjct: 299 IGYGLRPDHPLEKKAKNPGNGKSTAISFDEYAKFVSTYTLEYAAKMSGVEPEKLETLAKA 358

Query: 361 YADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACGTAR 420
           YADP+ K+MSLWTMG+NQH RGVW  +++YN+HLLTGKIATPGNSPFSLTGQPSACGTAR
Sbjct: 359 YADPSVKIMSLWTMGINQHVRGVWANNMLYNIHLLTGKIATPGNSPFSLTGQPSACGTAR 418

Query: 421 EVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAVQQDRMLKDGVLNCYWV 480
           EVGTFAHRLPADMVVANPKHRA+ EK+W+LPEGTIP KPGFHAV Q RMLKDG LNCYW 
Sbjct: 419 EVGTFAHRLPADMVVANPKHRAVTEKLWQLPEGTIPPKPGFHAVLQSRMLKDGKLNCYWT 478

Query: 481 QCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQAADLVLPTAMWVEKEGAYGNA 540
            C NNMQAGPNIN+E  PG+RNP+NFIVVSD YPTVTA AADL+LPTAMWVEKEGAYGNA
Sbjct: 479 MCTNNMQAGPNINDEIYPGFRNPDNFIVVSDPYPTVTAMAADLILPTAMWVEKEGAYGNA 538

Query: 541 ERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPEELLAKAPQYRGKTLYDVLFKN 600
           ERRT +W+QQVK    + SD WQ++EFSKRFKV +VWP EL+AK P+Y  KTL+DVLF N
Sbjct: 539 ERRTHMWHQQVKAPEGAKSDLWQLVEFSKRFKVSEVWPAELVAKKPEYADKTLFDVLFAN 598

Query: 601 GQVDKFPLSEAR-ELNDDAHHFGFYIQKGLFEEYAEFGRGHGHDLAPYDVYHQVRGLRWP 659
           G ++KFP S+ + ELND++  FGFY+QKG+FEEYA+FGRGH HDLA +D YH+ RGLRWP
Sbjct: 599 GVINKFPTSDCKGELNDESEAFGFYLQKGIFEEYAQFGRGHAHDLADFDTYHETRGLRWP 658

Query: 660 VVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISSPYEAPPEMPNEEYDLWLCTG 719
           VV+GKET  RF EGSDPY KAG G++FYGKPDGKA I + PYE   E PN EYDLW+ TG
Sbjct: 659 VVEGKETLRRFVEGSDPYVKAGEGYNFYGKPDGKAVIFALPYEPAAEEPNAEYDLWMSTG 718

Query: 720 RVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISNSRGEVRVRVET 779
           RVLEHWHTG+MT RVPELY+A PDA  FMH +DA+ARGL+RGDEV++++ RGEV+ RVET
Sbjct: 719 RVLEHWHTGSMTARVPELYRAYPDAQIFMHPDDAKARGLKRGDEVVVASPRGEVKTRVET 778

Query: 780 RGRNKPPKGLVFVPFFDARILVNKLILDATDPLSKQTDFKKCPVKITK 827
           +GRNKPP+G+VF+PFFDAR LVNKL+LDATDPLSK+TDFKKCPVK+ K
Sbjct: 779 KGRNKPPRGVVFMPFFDARQLVNKLLLDATDPLSKETDFKKCPVKVMK 826