Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 831 a.a., nitrate reductase (RefSeq) from Shewanella loihica PV-4

 Score = 1327 bits (3435), Expect = 0.0
 Identities = 617/830 (74%), Positives = 718/830 (86%), Gaps = 3/830 (0%)

Query: 1   MKMTRRAFVKANAAASAAAVAGITLPASATNLIASSDQTAIHWDKAPCRFCGTGCSVLVG 60
           MKM RR F+KANAA +AA+VAG+ LPA+A+NLI SS+QT + W+KAPCRFCGTGCSV+V 
Sbjct: 1   MKMNRREFMKANAAMAAASVAGLALPATASNLITSSEQTKLEWNKAPCRFCGTGCSVIVA 60

Query: 61  TQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKDGEFTPV 120
           T+DG+VVAT GD E+ VN+GLNCIKGYFLSKIMYG+DRL++P+LRM +G+Y K GEFTPV
Sbjct: 61  TRDGKVVATHGDAESEVNRGLNCIKGYFLSKIMYGKDRLQSPMLRMTNGKYDKHGEFTPV 120

Query: 121 SWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKAGFRSNNIDPNARH 180
           SWDTAFD MA+KWKA++K KGPT++GMFGSGQWTV EGYAA KLMKAGF SNNIDPNARH
Sbjct: 121 SWDTAFDTMADKWKATIKKKGPTAIGMFGSGQWTVWEGYAASKLMKAGFGSNNIDPNARH 180

Query: 181 CMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWTRITDRRLSHPHVK 240
           CMASAV GFMRTFGIDEPMGCYDD E+ADAFVLWGSNMAEMHP+LW+R+TDRRLS PHVK
Sbjct: 181 CMASAVGGFMRTFGIDEPMGCYDDMENADAFVLWGSNMAEMHPILWSRVTDRRLSAPHVK 240

Query: 241 VNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDFVNKHTHFKQAVTD 300
           V+VLST+ HRSF+LAD G +F PQ+DLAI NFI NYIIQNDAVNWDFVNKH +F++  TD
Sbjct: 241 VSVLSTFTHRSFDLADLGIVFTPQTDLAILNFIGNYIIQNDAVNWDFVNKHVNFRKGETD 300

Query: 301 IGYGLRDDHPLQKKAKNA-NSGDVSDISFEEYKKSVAPYTVEKASEISGVSPDKLITLAK 359
           IGYGLR  HPLQ+KAKN   +G  + I F+ +K  VA Y V   S++SGV  DKLI LAK
Sbjct: 301 IGYGLRPTHPLQQKAKNVKTAGKSTPIEFDAFKAFVADYDVASVSKLSGVPEDKLIELAK 360

Query: 360 QYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACGTA 419
            YADPNTKV S WTMG NQHTRGVW  +L+YN+HLLTGKI+TPGNSPFSLTGQPSACGTA
Sbjct: 361 LYADPNTKVTSFWTMGFNQHTRGVWCNNLIYNIHLLTGKISTPGNSPFSLTGQPSACGTA 420

Query: 420 REVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAVQQDRMLKDGVLNCYW 479
           REVGTF+HRLPAD+VV NP+HR IAEK+WK+P+G IP KPG+HAV+Q+R LKDG +N YW
Sbjct: 421 REVGTFSHRLPADLVVNNPEHRKIAEKIWKIPDGIIPPKPGYHAVEQNRRLKDGDINAYW 480

Query: 480 VQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQAADLVLPTAMWVEKEGAYGN 539
           VQ NNNMQAGPNINEE LPGYRNPENFIVVSDAYPTVT QAADL+LPTAMWVEKEGAYGN
Sbjct: 481 VQVNNNMQAGPNINEEGLPGYRNPENFIVVSDAYPTVTTQAADLILPTAMWVEKEGAYGN 540

Query: 540 AERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPEELLAKAPQYRGKTLYDVLFK 599
           AERRTQ W+Q VK  GES SD WQ++EFSKRF  ++VWP+E+LA  P+Y+GKTL+ VL++
Sbjct: 541 AERRTQFWHQMVKAPGESRSDLWQLMEFSKRFTTDEVWPKEVLAANPEYKGKTLFQVLYQ 600

Query: 600 NGQVDKFPLSEA--RELNDDAHHFGFYIQKGLFEEYAEFGRGHGHDLAPYDVYHQVRGLR 657
           NG VDKFPL +A  + +ND+A HFG+Y+QKGLFEEYA FGRGHGHDLA +D YH+V GLR
Sbjct: 601 NGNVDKFPLEQADPKYMNDEAKHFGYYVQKGLFEEYATFGRGHGHDLADFDTYHEVHGLR 660

Query: 658 WPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISSPYEAPPEMPNEEYDLWLC 717
           WPVV+GKETKWRF+EGSDPY K G+G+ FYGKPDGKA I + PYE   E P+EE++LWL 
Sbjct: 661 WPVVNGKETKWRFREGSDPYVKPGTGFQFYGKPDGKAVIYALPYEPAAESPDEEFNLWLS 720

Query: 718 TGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISNSRGEVRVRV 777
           TGRVLEHWH+G+MT+RVPELY+A PDA+CFMH EDA+ RGLRRGDEV + + RGE++ RV
Sbjct: 721 TGRVLEHWHSGSMTQRVPELYRAFPDAVCFMHPEDAKKRGLRRGDEVKVVSRRGEIKTRV 780

Query: 778 ETRGRNKPPKGLVFVPFFDARILVNKLILDATDPLSKQTDFKKCPVKITK 827
           ETRGRNKPP GLVFVP+FDA  L+NK+ LDATDPLSKQTDFKKC VK+ K
Sbjct: 781 ETRGRNKPPVGLVFVPWFDASQLINKVTLDATDPLSKQTDFKKCAVKVVK 830