Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1410 a.a., formate dehydrogenase, alpha subunit (RefSeq) from Shewanella loihica PV-4

 Score =  180 bits (456), Expect = 6e-49
 Identities = 149/555 (26%), Positives = 245/555 (44%), Gaps = 61/555 (10%)

Query: 48   CRFCGTGCSVLVGTQD--GRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLR 105
            C +CG GC V++ +    G +    GD  + VN+G+ C+KG F    +  Q RL  PLLR
Sbjct: 725  CTYCGVGCRVIIHSDPVTGEIKRVSGDSRSQVNEGMLCVKGRFGFDFINSQQRLTQPLLR 784

Query: 106  MKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLM 165
                   KDGE  PVSW+ A D +  +        G  ++    S + T  + Y   KL 
Sbjct: 785  -------KDGELVPVSWNEAIDYIGTELGRIKAEHGGDAIAGLASAKATNEDNYLFQKLF 837

Query: 166  KAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVL 225
            ++   +NNID  AR C AS V     + G           + +D   + GS+    HP++
Sbjct: 838  RSVIGTNNIDHCARLCHASTVTALQESLGSGAMTNDIPSIKSSDLIFILGSDTEAAHPII 897

Query: 226  WTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFH-PQSDLAIANFIANYIIQNDAVN 284
             ++I  ++    H    V++     S   +   Y+ H P SD+ + N I   II+    +
Sbjct: 898  ASKI--KQAVSQHGARLVVADPKRVSIADSAELYVRHRPGSDVMLLNAIMQEIIKQGWHD 955

Query: 285  WDFVNKHTH-FKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKA 343
             D++++    F    T++   ++DD                             Y+++ A
Sbjct: 956  EDYIDRRVEGFDALRTEV---MKDD-----------------------------YSLDNA 983

Query: 344  SEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPG 403
            ++I+GV  +++  LA+       K    + MG+ QHT G    + + NL LL G I   G
Sbjct: 984  AKITGVGEEEIAQLARMIGTAE-KTAIYYAMGITQHTSGHDNVTAIANLQLLCGNIGIEG 1042

Query: 404  NSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHA 463
                 L GQ +  G A ++G   +       V +P+ +A   + W+  +  +P++ G  A
Sbjct: 1043 AGINPLRGQSNVQG-ACDMGALPNYFTGYQKVTDPEVQAAFRQAWQ--QEWLPDQIGLAA 1099

Query: 464  VQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQAADL 523
             +    L  G L   +V   N + + P+     + G  + E  ++V D + T TAQ AD+
Sbjct: 1100 TEMMHALAHGRLKALYVMGENPVLSDPD-QAHVMQGLESAE-LLIVQDIFMTETAQLADV 1157

Query: 524  VLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVI-EFSKRFKVE-------D 575
            VLP A + EK G + N ERR Q     + + G +  D WQ+I + +K    +        
Sbjct: 1158 VLPAASFAEKPGHFTNTERRVQRLQAAIDSPGLARRD-WQIITDIAKALGADWHYEDEAS 1216

Query: 576  VWPEELLAKAPQYRG 590
            +W +EL    PQYRG
Sbjct: 1217 IW-QELTRVTPQYRG 1230



 Score = 84.3 bits (207), Expect = 4e-20
 Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 3/129 (2%)

Query: 701  YEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRR 760
            Y  P E+P E+Y   L TGR+LE +HTGT+TR+   L   +      M   DA   G+  
Sbjct: 1279 YRLPAELPCEDYPFTLSTGRLLEQFHTGTLTRKTDGL-NTLGSPRVMMSAIDADRLGVNN 1337

Query: 761  GDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFFDARILVNKLILDATDPLSKQTDFKK 820
            GD + +S  RG + +      R +P  G++F+PF  A    NKL  +  DP++K  +FK 
Sbjct: 1338 GDVLTLSTRRGSINIAAFVTRRAQP--GVLFLPFHFAEAAANKLTNNVLDPVAKIPEFKI 1395

Query: 821  CPVKITKVA 829
            C V++ K +
Sbjct: 1396 CAVRVEKAS 1404