Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 951 a.a., molybdopterin oxidoreductase (RefSeq) from Shewanella loihica PV-4

 Score =  114 bits (285), Expect = 3e-29
 Identities = 135/592 (22%), Positives = 235/592 (39%), Gaps = 86/592 (14%)

Query: 3   MTRRAFVKANAAASAAAVAGITLPASATNLIASSD---QTAIHWDKAPCRFCGTGCSVLV 59
           ++RR F+K     +    A   L         + D      I   +  C  C  GC +  
Sbjct: 20  ISRRQFMKHAGITTGGIAAASLLGTGMMRRAEAKDIPHDAPIEIKRTVCSACAVGCGLYA 79

Query: 60  GTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKDGEFTP 119
             Q+G     +   + P N G +C KG  L +  +G+ RLK P+ ++ DG++ K      
Sbjct: 80  EVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGEKRLKYPM-KLVDGKWKK------ 132

Query: 120 VSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKAGFRSNNIDPNAR 179
           +SW+ AF+ + +K ++  +  GP S+   GS +++  EG    +   A + +NN+D +AR
Sbjct: 133 LSWEQAFNEVGDKMQSIRQESGPDSLYFMGSAKFS-NEGCYMYRKFAAMWGTNNVDHSAR 191

Query: 180 HCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWTRITDRRLSHPHV 239
            C ++ V G   T+G       ++D ++A+A    GSN AE HPV    I   +  + + 
Sbjct: 192 ICHSTTVAGVANTWGYGAQTNSFNDIQNANAIFFIGSNPAEAHPVAMQHILIAKEKN-NA 250

Query: 240 KVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDFVNKHTHFKQAVT 299
           K+ V+   + R+   +D      P +D+     +  +I +N                   
Sbjct: 251 KIIVVDPRFSRTAAHSDLHCALRPGTDIPFIYGMLWHIFEN------------------- 291

Query: 300 DIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKASEISGVSPDKLITLAK 359
               G  D   +Q++              +  ++ V  +  ++ + I+GVS +++   AK
Sbjct: 292 ----GWEDKAFIQQRV----------FEMDTIREEVKKFPPQEVANITGVSEEQVYQAAK 337

Query: 360 QYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACGTA 419
             A+ N     +W MG  QH  G         L L  G +   G       G  +  G A
Sbjct: 338 LMAE-NRPGTVVWCMGGTQHHVGNANTRAYCILQLALGNMGVSGGGTNIFRGHDNVQG-A 395

Query: 420 REVGTFAHRLPA--DMVVANPKHRAIAEKVWKLP-------------EGTIP-EKPGFHA 463
            ++G     LP    +   + KH +    VW L               G IP   PG   
Sbjct: 396 TDLGLLFDTLPGYYGLKTGSWKHWS---HVWDLDFDWVKGRFDQNEYLGRIPMNTPGIPC 452

Query: 464 VQ-QDRML--------KDGV-LNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAY 513
            +  D +L        KD V +  +W Q  N         +  +    +  + +VV D +
Sbjct: 453 SRWHDGVLETPEKLAQKDRVRMAFFWGQSVNT-----ETRQREVRDALDKMDTVVVVDPF 507

Query: 514 PTVTA-----QAADLVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSD 560
           PT+       +    +LP A   E EG+  N+ R  Q   + ++ + ES +D
Sbjct: 508 PTMAGVMHRRKDGVYLLPAATQFETEGSVSNSGRSQQWREKVIEPLFESKTD 559



 Score = 42.4 bits (98), Expect = 1e-07
 Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 711 EYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISNSR 770
           +Y L L +GR++E+   G  +R  P L +   +    +H  DA  RG+R GD V +  + 
Sbjct: 814 KYPLGLTSGRLVEYEGGGEESRSNPWLAELQQEMFVEIHPGDAADRGIRNGDTVWLEGAE 873

Query: 771 GEVRVRVETRGRNKPPKGLVFVPFFDARIL 800
           G  R++++     +  +G+ ++P+  A ++
Sbjct: 874 GG-RIKIKAMVTPRVKQGVTWMPYHFAGVM 902