Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 949 a.a., molybdopterin oxidoreductase (RefSeq) from Shewanella loihica PV-4

 Score =  121 bits (303), Expect = 2e-31
 Identities = 134/608 (22%), Positives = 236/608 (38%), Gaps = 91/608 (14%)

Query: 3   MTRRAFVKANAAASAAAVAGITLPASATNLIASSD---QTAIHWDKAPCRFCGTGCSVLV 59
           ++RR F+++   A+    A   L A       + +          +  C  C  GC +  
Sbjct: 20  LSRRQFLQSAGLATGGIAAASMLGAGMMRKAEAKEVPHDAPTEVKRTICSHCSVGCGIYA 79

Query: 60  GTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKDGEFTP 119
             Q+G     +   + P N G +C KG  L +  +G+ RLK P+ +++ G++ +      
Sbjct: 80  EVQNGVWTGQEPAFDHPFNAGGHCAKGASLREHGHGEKRLKYPM-KLEGGKWKR------ 132

Query: 120 VSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKAGFRSNNIDPNAR 179
           +SWD A + + +K     K  GP S+   GS +++  + Y   K   A + +NN+D +AR
Sbjct: 133 ISWDQAIEEVGQKALDIRKESGPDSIFFMGSAKFSNEQAYLYRKFA-AMWGTNNVDHSAR 191

Query: 180 HCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWTRITDRRLSHPHV 239
            C ++ V G   T+G       ++D  +A A +  GSN +E HPV    I + +      
Sbjct: 192 ICHSTTVAGVANTWGYGAQTNSFNDIRNAKAMMFIGSNPSEAHPVAMQHILEGK--ERGA 249

Query: 240 KVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDFVNKHTHFKQAVT 299
           K+ V+   + R+   AD      P +D+     +  +I +N   +  F+++         
Sbjct: 250 KIIVVDPRFTRTAAKADEYVHIRPGTDIPYIYGLLWHIFENKWEDQTFIDQRV------- 302

Query: 300 DIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKASEISGVSPDKLITLAK 359
              YG+                       E  +++ A +  E+   + GV  +++  +AK
Sbjct: 303 ---YGM-----------------------ERIREAAAKWNPEEVENVVGVPKEQMYRVAK 336

Query: 360 QYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACGTA 419
             A+     + +W MG  QH  G         L L  G +   G       G  +  G A
Sbjct: 337 TLAETKPGTI-VWCMGGTQHHIGNANTRAYCILQLALGNMGVSGGGTNIFRGHDNVQG-A 394

Query: 420 REVGTFAHRLPA--DMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAVQ---QDRMLKDGV 474
            + G     LP    +   + KH      VW L    +  K  F   Q   QD M   G+
Sbjct: 395 TDFGLLFDTLPGYYGLKTGSWKHWC---NVWDLDYEWV--KARFDQEQRLGQDPMTSTGI 449

Query: 475 -----------------------LNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSD 511
                                  ++ +W Q  N    G  + E       N  + +VV D
Sbjct: 450 PCSRWHDGVLEDKSKIAQKDNIRMSFFWGQSVNTETRGREVREA-----LNKMDTVVVVD 504

Query: 512 AYPTV-----TAQAADLVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIE 566
            +PT+     T +    +LP A   E  G+   + R  Q   Q ++ + ES  D   + +
Sbjct: 505 PFPTMAGVMHTRKDGVYLLPAATQFETYGSVSASNRSLQWRSQVIEPLFESKPDHVIMYK 564

Query: 567 FSKRFKVE 574
            +K++ +E
Sbjct: 565 LAKKWGIE 572



 Score = 39.3 bits (90), Expect = 1e-06
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 710 EEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISNS 769
           +E+ L L +GR++E+   G  TR  P L +   +    ++  DA  RGLR GD V + + 
Sbjct: 811 KEFPLALTSGRLVEYEGGGEETRSNPWLAELQQEMFIEINPADAADRGLRDGDVVWVHSP 870

Query: 770 RGEVRVRVETRGRNKPPKGLVFVPF 794
            G  +++V+     +  +G  F+P+
Sbjct: 871 EG-AKIKVQAMVTPRVIEGECFMPY 894