Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., formate dehydrogenase subunit alpha from Methanococcus maripaludis JJ

 Score =  248 bits (633), Expect = 8e-70
 Identities = 214/796 (26%), Positives = 337/796 (42%), Gaps = 145/796 (18%)

Query: 48  CRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMK 107
           C +CGTGC + +  +DG+VV +      PVN+G  CIKG +  + ++ +DRL  PL++  
Sbjct: 11  CPYCGTGCGIDLVVKDGKVVDSHPFKRHPVNEGKVCIKGNYCYEFVHSEDRLTKPLIK-- 68

Query: 108 DGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKA 167
                K+GEF   +WD A D++A K    LK   P  V  F   + T  E YA  K  + 
Sbjct: 69  -----KNGEFIEATWDEALDLIAGK----LKQYSPDEVAFFSCARGTNEESYALQKFART 119

Query: 168 GFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWT 227
             ++NN+D  AR   A  VVG    FG         D   AD  +++GSN  E HP++  
Sbjct: 120 VLKTNNVDHCARIUHAPTVVGLGECFGSGAMTNSITDLAQADVLLIYGSNTFEAHPLIAR 179

Query: 228 RITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDF 287
            I + + +    K+  +      + ++AD      P S++ + N I N IIQ    + +F
Sbjct: 180 SIVNAKENG--TKIIAIDPRTTHTAKMADLHLKLIPGSNIDLINTITNIIIQEGMADEEF 237

Query: 288 VNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKASEIS 347
           +   T                                   ++E K  V+ YT+EK +E+S
Sbjct: 238 IKNRTE---------------------------------GYDELKDVVSKYTLEKTAELS 264

Query: 348 GVSPDKLITLAKQYADP-NTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSP 406
           G+  + ++  A+ Y    N  +M  + +G+ ++T GV       NL ++TG +  PG   
Sbjct: 265 GIPAETILEAARMYGSAENASIM--YCLGVTEYTFGVDNVKSCCNLAMVTGNLGRPGTGV 322

Query: 407 FSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEG------TIPE--- 457
             L GQ +  G A ++G   +  P    V     R   E +W+  +       T PE   
Sbjct: 323 NPLRGQNNVQG-ACDMGALPNVFPGYQKVGEAYERL--EDLWETADLNREIGLTSPEVLH 379

Query: 458 KPG-----FHAVQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDA 512
           + G      H V +D M+ D  +N                 E+ L       +  VV D 
Sbjct: 380 EAGKQIKYLHIVGEDPMVADADINHV---------------EKALKSL----DLFVVQDI 420

Query: 513 YPTVTAQAADLVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFK 572
           + T TA+ AD+VLP A W EK+G + N+ERR Q   + V   GE+  D W ++       
Sbjct: 421 FLTETAKLADVVLPAACWAEKDGTFTNSERRVQRIRKAVDAPGEALPD-WLIVR------ 473

Query: 573 VEDVWPEELLAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEE 632
                                  +  K G  +K     A E+ D+           +  +
Sbjct: 474 ----------------------KLAEKMGAGEKLKFESASEIFDE--------MAKVIPQ 503

Query: 633 YAEFGRGHGHDLAPYDVYHQVRGLRWPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDG 692
           YA    G   +    D      GL+WP           K   DP         F  +P+G
Sbjct: 504 YA----GMSFERLGID------GLQWPC----------KTPEDPGTPILHKEKFL-RPNG 542

Query: 693 KAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHED 752
                   ++   E+ +EEY L L TGR++ H+++GTMTRR   +   + +    ++ ED
Sbjct: 543 LGKFTPVEHKDADELIDEEYPLILTTGRIIFHYNSGTMTRRCESITNEIDENFIEINTED 602

Query: 753 AQARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFFDARILVNKLILDATDPL 812
           A+  G++ G++V +S+ RG   V    R      KG+V++ F       NKL   A DP+
Sbjct: 603 AKELGIKPGEKVRVSSRRG--TVNANARVTENVIKGVVYMSFHFLEEATNKLTNSAYDPV 660

Query: 813 SKQTDFKKCPVKITKV 828
           SK  + K C VK+ K+
Sbjct: 661 SKTAELKICAVKVEKI 676