Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1012 a.a., formate dehydrogenase, alpha subunit, selenocysteine-containing (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  113 bits (282), Expect = 6e-29
 Identities = 178/713 (24%), Positives = 277/713 (38%), Gaps = 128/713 (17%)

Query: 1   MKMTRRAFVKANAAASAAAVAGITLPASATNLI---ASSDQTAIHWDK---APCRFCGTG 54
           MK TRR+F+K        +V G++L     +L    A + +  I   K     C FC   
Sbjct: 1   MKTTRRSFLKL----VGVSVVGLSLGQLGFDLEDAQAYAVKLKIEGAKEVGTVCPFCSVC 56

Query: 55  CSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKD 114
           C V+   ++G++V+T+GDP+ PVN+G  C KG  L  +     RL  PL R      H D
Sbjct: 57  CQVIAYVRNGKLVSTEGDPDFPVNEGALCAKGAALFSMYTNPHRLTKPLYRAP----HSD 112

Query: 115 GEFTPVSWDTAFDVMAEKWKAS------LKT-KGPT-----SVGMFGSGQWTVMEGYAAV 162
            ++    WD   + +A + K +      LK  KG T     S+ M G+      E  A +
Sbjct: 113 -KWVEKDWDWTLNQIARRVKDARDKDMILKNDKGQTVNRLESIFMMGTSH-ASNEECAVI 170

Query: 163 KLMKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMH 222
                G    ++D  AR   +  V     +FG       + D ++ DA ++ GSN AE H
Sbjct: 171 HQAMRGLGVVHMDHQARVUHSPTVAALAESFGRGAMTNHWIDIKNTDAVLIIGSNAAEHH 230

Query: 223 PVLWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDA 282
           PV +  I  R   +  V ++V    + R+    D        +D+A    + N+II  D 
Sbjct: 231 PVAFKWIM-RARDNGAVLMHV-DPKFSRTSARCDFHVPLRSGTDIAFLGGMVNHIIAKDL 288

Query: 283 VNWDFVNKHTHFKQAVTDIGYGLRD-------------DHPLQKKAKNANSGDVSDIS-- 327
              D+V  +T+    V    Y   D             D    +  K  + G V D +  
Sbjct: 289 YFKDYVANYTN-AAFVVGKDYAFEDGIFSGYDPKTRTYDRSKWEFEKGPDGGPVMDPTLK 347

Query: 328 -----FEEYKKSVAPYTVEKASEISGVSPDKLITLAKQY---ADPNTKVMSLWTMGMNQH 379
                F   KK    YT++  S+++GVS + L+ +   +     P+     L+ +G  QH
Sbjct: 348 NERCVFNLMKKHYERYTLKNVSDVTGVSEENLLRVYDAFCATGRPDKAGTILYALGWTQH 407

Query: 380 TRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACGTAREVGTFAHRLP--------- 430
           T GV        + LL G I   G    +L G+P+  G+  +     H LP         
Sbjct: 408 TVGVQNIRTSTLIQLLLGNIGVAGGGINALRGEPNVQGST-DHALLYHILPGYNAMPVAQ 466

Query: 431 ----ADMVVAN----------------PKHRAIAEKVWKLPEGTIPE------------- 457
               AD   AN                PK+ A   K W   +   PE             
Sbjct: 467 WQTLADYNKANTPVTTLKNSANWWSNRPKYVASLLKGW-FGDAATPENDFCYEYLPKLEK 525

Query: 458 -KPGFHAVQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAY--- 513
            +   +    DRM   G L   ++   N M + PN N+ R     +  +++V S+ +   
Sbjct: 526 GEDYSYMYVMDRMY-HGKLKGGFIFGVNPMNSFPNTNKMR--AALDKLDWLVCSELHNSE 582

Query: 514 -------PTVTAQAAD---LVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQ 563
                  P V  +A      +LP+A  VEK G   N+ R  Q W+ +    G++ + +  
Sbjct: 583 TTDNWKRPGVDPKACKTEVFLLPSAHRVEKAGTISNSGRWLQ-WFDKAVEPGQARNFADI 641

Query: 564 VIEFSKRFKVEDVWPEELLAKAPQYRGKTLYDVLFKNGQVDKF-PLSEARELN 615
            +    + +         L KA    G TL D + K    DKF P    R +N
Sbjct: 642 FVPLVNKIRA--------LYKA---EGGTLPDPVLKLHWTDKFDPEEWTRRIN 683



 Score = 49.3 bits (116), Expect = 1e-09
 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 12/129 (9%)

Query: 711  EYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISNSR 770
            +Y + L T  + EHW  G  TR VP L +  P     M  E A+ +G++ GD V++ + R
Sbjct: 876  KYPIVLTTYSLTEHWCGGGETRNVPNLLETEPQLYIEMSPELAEEKGIKNGDGVIVESIR 935

Query: 771  GEVRVRVETRGRNKP------PKGLVFVPFF------DARILVNKLILDATDPLSKQTDF 818
            G          R +P         LV +PF             N+L + A DP +   + 
Sbjct: 936  GRAEAIAMVTVRIRPFTVMGKTVHLVGMPFAYGWTTPKCGDSTNRLTVGAYDPNTTIPES 995

Query: 819  KKCPVKITK 827
            K C V + K
Sbjct: 996  KACLVNVRK 1004