Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 831 a.a., periplasmic nitrate reductase, large subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 1245 bits (3222), Expect = 0.0
 Identities = 595/826 (72%), Positives = 683/826 (82%), Gaps = 3/826 (0%)

Query: 4   TRRAFVKANAAASAAAVAGITLPASATNLIASSDQTAIHWDKAPCRFCGTGCSVLVGTQD 63
           +RR F+KA+AAA+ A+ AGI L A+ T   A +  T I WDKA CRFCGTGCSVLVGT++
Sbjct: 6   SRRTFLKASAAAATASAAGIPL-ANGTAAEAQAISTGIRWDKAACRFCGTGCSVLVGTKE 64

Query: 64  GRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKDGEFTPVSWD 123
           GRVVATQGDP+APVN+GLNCIKGYFLSKIMYG+DRL  PLLR  +G Y K+G F PVSWD
Sbjct: 65  GRVVATQGDPDAPVNRGLNCIKGYFLSKIMYGEDRLTMPLLRKTNGVYDKNGTFEPVSWD 124

Query: 124 TAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKAGFRSNNIDPNARHCMA 183
            AFDVMA+KWK +L  KGPTSVGMFGSGQWTV EGYAA KLMKAGFRSNNIDPNARHCMA
Sbjct: 125 EAFDVMAQKWKEALAKKGPTSVGMFGSGQWTVWEGYAAAKLMKAGFRSNNIDPNARHCMA 184

Query: 184 SAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWTRITDRRLSHPHVKVNV 243
           SAVVGFMRTFGIDEPMGCYDDFEHAD FVLWGSNMAEMHP+LW+R+TD RL+ P  +V+V
Sbjct: 185 SAVVGFMRTFGIDEPMGCYDDFEHADTFVLWGSNMAEMHPILWSRLTDTRLTKPGSEVHV 244

Query: 244 LSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDFVNKHTHFKQAVTDIGY 303
           LSTY HRSFELAD+G +F PQ+DLAI N+IANYII    VN DF++KH +  +  TDIGY
Sbjct: 245 LSTYEHRSFELADNGMVFAPQTDLAILNYIANYIISTGRVNEDFMSKHVNITKTATDIGY 304

Query: 304 GLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKASEISGVSPDKLITLAKQYAD 363
           GLRD+H LQ++A+N NSG +  ISF+EY  SVA YTV+K SE+SGV   +L  LA+QYAD
Sbjct: 305 GLRDEHALQQEAENPNSGKLEPISFDEYAASVAEYTVDKVSELSGVPAAQLEKLAEQYAD 364

Query: 364 PNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACGTAREVG 423
           PN KVMSLWTMG NQHTRG W+ SL+YN+HLL GKI+ PGNSPFSLTGQPSACGTAREVG
Sbjct: 365 PNRKVMSLWTMGFNQHTRGSWVNSLMYNVHLLVGKISEPGNSPFSLTGQPSACGTAREVG 424

Query: 424 TFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAVQQDRMLKDGVLNCYWVQCN 483
           TFAHRLPADMVV N  HRA+ EK W LPEGTIP KPGFHAV Q R LKDG LN YWVQCN
Sbjct: 425 TFAHRLPADMVVMNDAHRALTEKKWNLPEGTIPAKPGFHAVLQHRKLKDGDLNAYWVQCN 484

Query: 484 NNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQAADLVLPTAMWVEKEGAYGNAERR 543
           NNMQA PN+NEE  PGYRNPENFI VSD YPTVT  +ADL+LPTAMWVEKEGAYGNAERR
Sbjct: 485 NNMQAAPNMNEEGYPGYRNPENFITVSDPYPTVTTMSADLILPTAMWVEKEGAYGNAERR 544

Query: 544 TQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPEELLAKAPQYRGKTLYDVLFKNGQV 603
           TQ W QQVK  GE+ SD WQ++EFSKRF +E+VW EELLAK P++RGKT+YDVLF NG+V
Sbjct: 545 TQFWRQQVKAPGEAKSDLWQLMEFSKRFTIEEVWGEELLAKMPEHRGKTMYDVLFANGKV 604

Query: 604 DKFPLSEARE--LNDDAHHFGFYIQKGLFEEYAEFGRGHGHDLAPYDVYHQVRGLRWPVV 661
           DK+PLSE  E   ND++ HFG+Y+QKGLFEEYA FGRG  HDLA ++ YHQ RGLRWPVV
Sbjct: 605 DKYPLSETAEGFDNDESEHFGYYVQKGLFEEYAGFGRGKAHDLASFETYHQSRGLRWPVV 664

Query: 662 DGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISSPYEAPPEMPNEEYDLWLCTGRV 721
           DG+ET +RF+EG DPY   G G  FYG  DGKA II +PYE  PE+P+ E+DLWLCTGRV
Sbjct: 665 DGQETLYRFREGYDPYVPEGEGVRFYGHSDGKAKIIYAPYEPAPEVPDAEFDLWLCTGRV 724

Query: 722 LEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISNSRGEVRVRVETRG 781
           LEHWH+G+MTRRVPEL++A P A+ +MH EDA+ARGLRRG E+ IS  RG++  RVETRG
Sbjct: 725 LEHWHSGSMTRRVPELHRAYPAAVVYMHPEDAKARGLRRGQEINISTRRGDMLSRVETRG 784

Query: 782 RNKPPKGLVFVPFFDARILVNKLILDATDPLSKQTDFKKCPVKITK 827
           RNK P+GLVFVP+FD   L+N+L LDAT PLSK+TDFKKC  K+ +
Sbjct: 785 RNKVPQGLVFVPWFDEGQLINQLTLDATCPLSKETDFKKCACKVER 830