Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 933 a.a., formate dehydrogenase, alpha subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  177 bits (448), Expect = 3e-48
 Identities = 144/528 (27%), Positives = 226/528 (42%), Gaps = 55/528 (10%)

Query: 48  CRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMK 107
           C FCG GC V +  +DG +V   G    P N+G  C+KG F    ++   RL  PL+R  
Sbjct: 239 CPFCGVGCQVSLKVKDGAIVKADGI-NGPANEGRLCVKGRFGFDYIHHPHRLTKPLIRRD 297

Query: 108 D----GQYHKDGE----FTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGY 159
           D    G     G     F   +W+ A D  A          G  SV  FGS + T  E Y
Sbjct: 298 DAPEKGLNVDPGNPWTHFREATWEEALDAAAHGLGDLRSFYGGKSVAGFGSAKCTNEEAY 357

Query: 160 AAVKLMKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMA 219
              KL++  F  NN+D   R C AS+V   M   G       +++ E+AD  ++ G+N  
Sbjct: 358 LFQKLIRQAFGHNNVDHCTRLCHASSVAAMMENIGSGAVTATFNEIENADVAIVIGANPT 417

Query: 220 EMHPVLWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQ 279
           E HPV  T    ++ +    ++ VL          A H   F P +D+A+ N I N I++
Sbjct: 418 ENHPVAATFF--KQFAKRGGELIVLDPRGQALKRHAAHMLQFRPGTDVALLNGIMNVIVE 475

Query: 280 NDAVNWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYT 339
               +  ++   T                                   F E+++ +  +T
Sbjct: 476 EKLYDRQYIEGFTE---------------------------------GFFEFREHIRAFT 502

Query: 340 VEKASEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKI 399
            E+ +E+ G+   ++  +A+ +A      M  W MG++QH  G      + +L LL G +
Sbjct: 503 PERMAELCGIEAAQIRAVARSFARARAG-MIFWGMGVSQHIHGTDNARCLISLALLCGHV 561

Query: 400 ATPGNSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGT-IPEK 458
             PG     L GQ +  G A + G     LP    V +P+ R +   +WK   GT I   
Sbjct: 562 GRPGTGLHPLRGQNNVQG-ASDAGLIPQVLPDYQNVTDPEVRELFRHIWK---GTQIDAT 617

Query: 459 PGFHAVQ-QDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVT 517
           PG   V+  DR+ + G +   ++   N   + P++   R        + +VV D + T T
Sbjct: 618 PGLTVVEIMDRVYR-GEIRGMYILGENPAMSDPDVEHARKA--LAHLDHLVVQDIFLTET 674

Query: 518 AQAADLVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVI 565
           A  AD++LP + + EK G   N  R+ Q+  + V   GE+  D W++I
Sbjct: 675 ANYADVILPASAFPEKTGTVTNTNRQVQMGRKAVDAPGEARED-WRII 721



 Score = 84.7 bits (208), Expect = 2e-20
 Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 2/141 (1%)

Query: 685 DFYGKPDGKAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDA 744
           D + +  G+A    +    P E+P+E Y + L TGR LEHWHTG+MTRR   L    P+A
Sbjct: 783 DGFPRRAGRAMFTPARVTPPAEVPDERYPMILTTGRQLEHWHTGSMTRRASVLDAVEPEA 842

Query: 745 LCFMHHEDAQARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFFDARILVNKL 804
            C +H +  +  G+  G  V ++  RG + V    R      + +VF+PF       N L
Sbjct: 843 NCSLHPKTLRKLGVEPGGHVRLTTRRGTITVM--ARADRAVAEDMVFLPFAYVEAAANIL 900

Query: 805 ILDATDPLSKQTDFKKCPVKI 825
              A DP  K  +FK   V++
Sbjct: 901 TNAALDPYGKIPEFKFAAVRV 921