Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1432 a.a., formate dehydrogenase, alpha subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  156 bits (394), Expect = 9e-42
 Identities = 142/564 (25%), Positives = 236/564 (41%), Gaps = 58/564 (10%)

Query: 37   DQTAIHWDKAPCRFCGTGC--SVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMY 94
            D T +      C +CG GC   + +     R+   +G+ ++ VN+G+ C+KG F    ++
Sbjct: 735  DCTELKTASTICTYCGVGCRLDLKIDPNANRIRHIEGNKDSVVNQGMLCVKGRFGFDFIH 794

Query: 95   GQDRLKTPLLRMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWT 154
               RL TPL+R       K+GE  P SW  A   +A++     +  G  ++    S + T
Sbjct: 795  SDKRLTTPLIR-------KNGELQPSSWPEAIAYVAKRLTEIKQKDGSNALASLASAKAT 847

Query: 155  VMEGYAAVKLMKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLW 214
              + +   K +++   +NNID  AR C +S V G  ++ G           + +D   + 
Sbjct: 848  NEDNFVLQKFVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIKDSDVIFIL 907

Query: 215  GSNMAEMHPVLWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIA 274
            GS+    HP++ ++I    + H   ++ V         E A+      P +D+ + N I 
Sbjct: 908  GSDTTCAHPIIASKIQQAVMQH-GARLLVADPKRVGIAEKAELYVAHRPGTDVMLLNAIM 966

Query: 275  NYIIQNDAVNWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKS 334
              II++D   W                          Q KA  A   +  +  + E  K 
Sbjct: 967  AEIIRHD---W--------------------------QDKAYIAERTEGIEALYAELAKD 997

Query: 335  VAPYTVEKASEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHL 394
               Y++E A+ I+GV  + +  LA+       K    + MG+ QHT G    + + NL L
Sbjct: 998  --DYSLENAALITGVKAEDIARLARTIGTAE-KTAVYYAMGITQHTTGHDNVTAISNLQL 1054

Query: 395  LTGKIATPGNSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGT 454
            L G I   G     L GQ +  G A ++G   +       V +   R   E  W   +  
Sbjct: 1055 LCGNIGVSGAGINPLRGQSNVQG-ACDMGALPNYFTGYQKVTDLHARMRFENHW---QTR 1110

Query: 455  IPEKPGFHAVQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYP 514
            +  + G  A      +  G +   +V   N + + P  ++  +    +   F+VV D + 
Sbjct: 1111 LSGEIGVTATHMMHDIAKGKIKALYVMGENPVLSDP--DQAHVLNALSQIEFLVVQDIFL 1168

Query: 515  TVTAQAADLVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKR---- 570
            T TA+ A +VLP A +VEK G + N ERR Q   Q + + GE+  D WQ+++        
Sbjct: 1169 TETAELAHVVLPAAAFVEKRGHFTNTERRVQRLEQALASPGEALPD-WQIVQAVANAMGA 1227

Query: 571  ----FKVEDVWPEELLAKAPQYRG 590
                   E +W  E+    PQYRG
Sbjct: 1228 NWDYTNEEAIW-REINELTPQYRG 1250



 Score = 85.9 bits (211), Expect = 2e-20
 Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 5/129 (3%)

Query: 701  YEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPEL-YKAVPDALCFMHHEDAQARGLR 759
            Y  P EMP  EY L L TGR+LE +HTGT+TR+ P L     P  +  ++  DA+  G+ 
Sbjct: 1300 YRLPAEMPCNEYPLTLSTGRLLEQFHTGTLTRKTPGLDLLGAPKVMISVY--DAEQLGIN 1357

Query: 760  RGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFFDARILVNKLILDATDPLSKQTDFK 819
             GD++ ++  RGE+ +      R +   G++F+PF       NKL ++A DP++   ++K
Sbjct: 1358 NGDKLRLTTRRGEIEIDAFVTKRAQ--AGVLFLPFHFVEAAANKLTINALDPVAYIPEYK 1415

Query: 820  KCPVKITKV 828
             C V+  KV
Sbjct: 1416 VCAVRAEKV 1424