Pairwise Alignments

Query, 168 a.a., ferredoxin-type protein NapF from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., quinol dehydrogenase periplasmic component (RefSeq) from Shewanella loihica PV-4

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 41/151 (27%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 25  VRLPWLARPDAFTDECTRCGKCVTACETHII------EKGDGGFPTVNFSIDECTFCYQ- 77
           +R P       F   C RCG CV AC    +      E    G P        C  C   
Sbjct: 51  IRPPGALDEQDFLSACVRCGLCVQACPYDTLKLARWFEGAPTGTPYFTARTVPCEMCEDI 110

Query: 78  -CAQSCPEPLFVAQSEAPWQAKVHIT-----HHCLAQQQVECRSCQDACP--EEAIHFAL 129
            C ++CP            +AK+ I       +CL  + + C  C   CP  + AI    
Sbjct: 111 PCVKACPSGSLDHALTNIDEAKMGIAVLIDEKNCLNFKGLRCDVCYRICPLIDNAITLER 170

Query: 130 QIGRTAS------PQVNSEQCSGCGACVSVC 154
           Q  + +       P VNS+ C+GCG C   C
Sbjct: 171 QHNQRSDHHAMFLPTVNSDTCTGCGKCEHAC 201



 Score = 23.5 bits (49), Expect = 0.003
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 144 CSGCGACVSVCPSNAM 159
           C  CG CV  CP + +
Sbjct: 66  CVRCGLCVQACPYDTL 81