Pairwise Alignments

Query, 168 a.a., ferredoxin-type protein NapF from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., formate dehydrogenase, beta subunit, Fe-S containing from Dechlorosoma suillum PS

 Score = 43.5 bits (101), Expect = 3e-09
 Identities = 40/133 (30%), Positives = 54/133 (40%), Gaps = 19/133 (14%)

Query: 4   NMVDLSKRRW----FTPNRQPNQSQVRLPWLARPDAFTDECTRCGK--CVTACETH--II 55
           N  DLS + W    F    QP+ S  +L WL R D     C  C    C+ AC +   II
Sbjct: 65  NPTDLSAQAWTVMRFNEVEQPDVSGGKLEWLIRKDG----CMHCADPGCLKACPSPGAII 120

Query: 56  EKGDGGFPTVNFSIDECTFCYQCAQSCPEPLFVAQSEAPWQAKVHITHHCLAQQQV-ECR 114
           +  +G    V+F  + C  C  C   CP   F      P   K +  + C  +  V +  
Sbjct: 121 QYKNG---IVDFHQENCIGCGYCVSGCP---FNVPRINPKDNKAYKCNLCSDRVAVGQEP 174

Query: 115 SCQDACPEEAIHF 127
           +C   CP  AI F
Sbjct: 175 ACVKTCPTGAIQF 187



 Score = 32.3 bits (72), Expect = 7e-06
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)

Query: 116 CQDACPEEAIHFALQIGRTASPQVNSEQCSGCGACVSVCPSNAMTVH 162
           C  ACP        + G       + E C GCG CVS CP N   ++
Sbjct: 109 CLKACPSPGAIIQYKNGIV---DFHQENCIGCGYCVSGCPFNVPRIN 152