Pairwise Alignments

Query, 168 a.a., ferredoxin-type protein NapF from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 15/140 (10%)

Query: 30  LARPDAFTDECTRCGKCVTACETHIIE-----KGDGGF--PTVNFSIDEC-TFCYQCAQS 81
           L  PD F   C RCG C  AC T+ ++      G  G   P V  +   C   C+ CA++
Sbjct: 414 LPEPD-FLARCVRCGLCAAACPTNTLQPAWLASGALGMFSPVVTPARGFCDPACHACARA 472

Query: 82  CPEPLFVAQSEAPWQAKVH----ITHHCLA-QQQVECRSCQDACPEEAIHFALQIGRTAS 136
           CP       ++    AK+     +  HCLA  ++  C  C + CP +AI    + G T  
Sbjct: 473 CPTTAIRRLADERTFAKIGTAEVLRDHCLAWAKKKRCLVCDEVCPYDAIALKPEPGYTVG 532

Query: 137 -PQVNSEQCSGCGACVSVCP 155
            P V+  +C+GCG C   CP
Sbjct: 533 VPHVDPARCAGCGFCEKHCP 552



 Score = 34.7 bits (78), Expect = 3e-06
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 10/57 (17%)

Query: 72  CTFCYQCAQSCPEPLFVAQSEAPWQAKVHITHHCLAQQQVECRSCQDACPEEAIHFA 128
           CT C  CA+ CP     A       A    T H    + ++C  C D CP +A+ FA
Sbjct: 254 CTACGACARRCPAGAIPA-------AAPRATDHA---ECLKCLRCADVCPVDAVRFA 300



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 7/56 (12%)

Query: 28  PWLARPDAFTDECTRCGKCVTACETHIIEKGDGGFPTVNFSIDECTFCYQCAQSCP 83
           PW  R +     CT CG C   C    I       P       EC  C +CA  CP
Sbjct: 245 PWRRRVE---HACTACGACARRCPAGAIP---AAAPRATDHA-ECLKCLRCADVCP 293



 Score = 28.1 bits (61), Expect = 3e-04
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 116 CQDACPEEAIHFALQIGRTASPQVNSEQ--CSGCGACVSVCPSNAM 159
           C+  CP  A   A+ +   A+P     +  C+ CGAC   CP+ A+
Sbjct: 227 CRMLCPAGA---AMGLAGRAAPWRRRVEHACTACGACARRCPAGAI 269



 Score = 25.8 bits (55), Expect = 0.002
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 143 QCSGCGACVSVCPSNAM 159
           +C  CG C + CP+N +
Sbjct: 422 RCVRCGLCAAACPTNTL 438



 Score = 25.0 bits (53), Expect = 0.003
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 6/55 (10%)

Query: 111 VECRSCQDACPEEAIHFA-LQIGRTA--SPQVNSEQ--CS-GCGACVSVCPSNAM 159
           V C  C  ACP   +  A L  G     SP V   +  C   C AC   CP+ A+
Sbjct: 424 VRCGLCAAACPTNTLQPAWLASGALGMFSPVVTPARGFCDPACHACARACPTTAI 478