Pairwise Alignments
Query, 168 a.a., ferredoxin-type protein NapF from Vibrio cholerae E7946 ATCC 55056
Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Score = 63.5 bits (153), Expect = 5e-15
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 18/122 (14%)
Query: 40 CTRCGKCVTACETHIIEKGDGGFPTVNFSIDECTFCYQCAQSCPEPLFVAQSEAPWQAKV 99
C CG CV C ++ + +G + + CT C C + CP+ + + + E
Sbjct: 266 CINCGLCVDKCPSNALRFENG---KILYDPKTCTLCNTCVKECPQGVRINKGE------- 315
Query: 100 HITHHCLAQQQVECRSCQDACPEEAIHFALQIGRTASPQVNSEQCSGCGACVSVCPSNAM 159
+ C V C C CPE+AI R+ ++ E+C CG C VCP++A+
Sbjct: 316 FVDGGC-----VLCELCIKECPEDAISIK---ERSKFTSIDKEECIACGTCSMVCPNDAI 367
Query: 160 TV 161
TV
Sbjct: 368 TV 369
Score = 57.0 bits (136), Expect = 4e-13
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 23/138 (16%)
Query: 38 DECTRCGKCVTACETHIIE--------KGDGGFPTVNFSIDECTFCYQCAQSCPEPLFVA 89
+EC CG C C I G+ V F+ D C C +CA CP V
Sbjct: 350 EECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFN-DNCVICEKCAIHCPRD--VI 406
Query: 90 QSEAPWQAKVHITHHCLAQQQ---VECRSCQDACPEEAIHFALQIGRTASPQVNSEQCSG 146
++ + + V + + V+C C CP +AI ++N+E+C
Sbjct: 407 ENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAID---------KGEINTEKCEY 457
Query: 147 CGACVSVCPSNAMTVHYT 164
C ACV++CP+ A+ ++ T
Sbjct: 458 CSACVNICPTRAIRIYRT 475
Score = 53.1 bits (126), Expect = 6e-12
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 33/128 (25%)
Query: 39 ECTRCGKCVTACETHIIEKGDGGFPTVNFSIDECTFCYQCAQSCP-EPLFVAQSEAPWQA 97
+C CGKC+ C I + + +D CT C C + CP + + Q
Sbjct: 180 KCVECGKCIYLCPKDTIIEAE--------MVDGCTRCNICNEVCPVDAIEYGQ------- 224
Query: 98 KVHITHHCLAQQQVECRSCQDACPEEAIHFA-LQIGRT-----ASPQVNSEQCSGCGACV 151
+T +C+ C +C CP++ + + ++ +T A P+ + C CG CV
Sbjct: 225 ---VTENCIL-----CGNCISKCPKDVLEISEFKVVKTKEDVKAKPE---KHCINCGLCV 273
Query: 152 SVCPSNAM 159
CPSNA+
Sbjct: 274 DKCPSNAL 281
Score = 50.8 bits (120), Expect = 3e-11
Identities = 33/124 (26%), Positives = 45/124 (36%), Gaps = 26/124 (20%)
Query: 38 DECTRCGKCVTACETHIIEKGDGGFPTVNFSIDECTFCYQCAQSCPEPLF------VAQS 91
D CTRC C C IE G + C C C CP+ + V ++
Sbjct: 203 DGCTRCNICNEVCPVDAIEYGQ--------VTENCILCGNCISKCPKDVLEISEFKVVKT 254
Query: 92 EAPWQAKVHITHHCLAQQQVECRSCQDACPEEAIHFALQIGRTASPQVNSEQCSGCGACV 151
+ +AK HC + C C D CP A+ F + + C+ C CV
Sbjct: 255 KEDVKAKPE--KHC-----INCGLCVDKCPSNALRF-----ENGKILYDPKTCTLCNTCV 302
Query: 152 SVCP 155
CP
Sbjct: 303 KECP 306
Score = 40.4 bits (93), Expect = 4e-08
Identities = 30/126 (23%), Positives = 43/126 (34%), Gaps = 23/126 (18%)
Query: 38 DECTRC-----GKCVTACETHIIEKGDGGFPTVNFSIDECTFCYQCAQSCPEPLFVAQSE 92
+EC C KC+ C T+ I+ DG C C CA+ CP
Sbjct: 13 EECEDCKNKEISKCMEVCPTNAIKMIDG-------KAFSCITCGTCAKECPTGAIKKNEY 65
Query: 93 APWQAKVHITHHCLAQQQVECRSCQDACPEEAIHFALQIGRTASPQVNSEQCSGCGACVS 152
+ + C C++ CP + I + P + C CG C +
Sbjct: 66 GGYYVNRKLC--------TGCGICKNVCPIDIIDIREDSTGKSYP---TGMCVMCGLCTT 114
Query: 153 VCPSNA 158
CP NA
Sbjct: 115 ECPYNA 120
Score = 39.3 bits (90), Expect = 1e-07
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 26/98 (26%)
Query: 66 NFSID--ECTFCYQCAQSCPEPLFVAQSEAPWQAKVHITHHCLAQQQVECRSCQDACPEE 123
+ SID +C C +C CP+ + + + C C C + CP +
Sbjct: 173 SISIDSKKCVECGKCIYLCPKDTII---------EAEMVDGC-----TRCNICNEVCPVD 218
Query: 124 AIHFALQIGRTASPQVNSEQCSGCGACVSVCPSNAMTV 161
AI + QV +E C CG C+S CP + + +
Sbjct: 219 AIEYG---------QV-TENCILCGNCISKCPKDVLEI 246
Score = 35.8 bits (81), Expect = 1e-06
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 111 VECRSCQDACPEEAIHFALQIGRTASPQVNSEQCSGCGACVSVCPSNAMTV 161
+ C +C CP AI + VN + C+GCG C +VCP + + +
Sbjct: 46 ITCGTCAKECPTGAI----KKNEYGGYYVNRKLCTGCGICKNVCPIDIIDI 92
Score = 28.1 bits (61), Expect = 2e-04
Identities = 17/62 (27%), Positives = 22/62 (35%), Gaps = 9/62 (14%)
Query: 98 KVHITHHCLAQQQVECRSCQDACPEEAIHFALQIGRTASPQVNSEQCSGCGACVSVCPSN 157
K C + E C + CP AI G+ S C CG C CP+
Sbjct: 8 KCRTYEECEDCKNKEISKCMEVCPTNAIKMI--DGKAFS-------CITCGTCAKECPTG 58
Query: 158 AM 159
A+
Sbjct: 59 AI 60