Pairwise Alignments

Query, 168 a.a., ferredoxin-type protein NapF from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 53.1 bits (126), Expect = 3e-12
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 22/142 (15%)

Query: 37  TDECTRCGKCVTACETHIIEKGDGGFPTVNFSIDECTFCYQCAQSCPE-PLFVAQSEAPW 95
           +++C RC  C   C    I++     P      ++C  C  CA++CP   + V +  A  
Sbjct: 45  SNKCIRCELCYEMCPVDAIKEPSVKSPA-EILPEKCVKCEICAKTCPVGAINVLEGRAKL 103

Query: 96  QA---------------KVHITHHCLAQQQ-VECRSCQDACPEEAIHFALQIGRTASPQV 139
           +                K+ +  H L ++  ++C  C+  CP  AI     + +  S  +
Sbjct: 104 EEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAI----TVEKRNSIDI 159

Query: 140 NSEQCSGCGACVSVCPSNAMTV 161
           N   C GC AC  VCP +A+ V
Sbjct: 160 NLNLCMGCTACEKVCPKSAIKV 181



 Score = 45.4 bits (106), Expect = 7e-10
 Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 16/136 (11%)

Query: 30  LARPDAFTDECTRCGKCVTACETHII--EKGDGGFPTVNFSIDECTFCYQCAQSCPEPLF 87
           L + +   + C +CG C   C T  I  EK +    +++ +++ C  C  C + CP+   
Sbjct: 124 LVKHELDEESCIKCGICERFCPTSAITVEKRN----SIDINLNLCMGCTACEKVCPKSAI 179

Query: 88  VAQSEAPWQAKVHITHHCLAQQQ--VECRSCQDACPEEAIHFALQIGRTASPQVNSEQCS 145
             ++E     ++   +         + C  C + CP  AI +          +++ + C 
Sbjct: 180 KVENE---MGEITAENEISLNNDTCINCMVCSEICPVGAIVY-----EDGLMKLDDKMCI 231

Query: 146 GCGACVSVCPSNAMTV 161
            CG C   CP  A+ +
Sbjct: 232 FCGKCEKNCPVTAIAI 247