Pairwise Alignments

Query, 583 a.a., nitrate/nitrite two-component system sensor histidine kinase NarQ from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., Nitrate/nitrite sensor protein (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  265 bits (678), Expect = 3e-75
 Identities = 178/585 (30%), Positives = 308/585 (52%), Gaps = 28/585 (4%)

Query: 14  VRHSLTRTMAKAMLLILFLSALTTGVAIVTLASSLNDAEAVNVSGSMRMQSYRLAYDIQT 73
           +R SL      A++LI  L+  ++  A +    S  DA A+N +GS+RM++Y L++ +  
Sbjct: 5   LRSSLPARAGLAVILIAILALASSLSAGLIAWFSQGDAAAINTAGSVRMETYHLSWKLAA 64

Query: 74  QSHD-YKAHIFLFENSLYSPSMLALLDWTVPSDIQQDYYQLIERWHE-LKKVLNSDQKAQ 131
            ++D   A I   +  L SP++ A+L+    + + + Y  L++RW++ L+  +     A 
Sbjct: 65  GANDDIPAIIASLQQRLDSPALRAVLEDGPETSLHKSYRDLVQRWNQTLRPAIERGDSAF 124

Query: 132 YLDQVAPFVSLVDGFVLKLQRFSERKLIALAAVGSFGLGGIFAVSLFVVYYIREQVVRPL 191
           +      FV  +D FV  LQR SE K      +    L     + L  +Y ++  VV PL
Sbjct: 125 FQASANTFVDQLDQFVTLLQRQSEHKQGWQQVIQGAALFSTMIILLIGLYELQYGVVTPL 184

Query: 192 NAMVDASEKIKNRNFDVMLEETSSTEMGILSRTFNSMAGDLGKLYRGLEHAVNEKTNKLQ 251
             +VDA+++ +   F V +   S  E+G L+ +FN+MA  + + +R LE+ V +KT  LQ
Sbjct: 185 QELVDATQRFRRGEFQVRVNHQSEDELGQLATSFNTMAETIEQSHRTLENQVQQKTLNLQ 244

Query: 252 MANQSLQVLYHSSQELTASRITASNFQTILRHWVALEGICALRLEIEEEAGKP---LILQ 308
            AN +L++LY SS+ L   +  A     ++R +        L L ++ +   P   L+  
Sbjct: 245 QANAALELLYQSSRSLATRQANAEGLDELIRRFQQRLPGLRLTLCLQGQLQAPARHLLAL 304

Query: 309 EGKPSGAVMLQTP----------------LTLDGHHLGFL---YWEAGSPEP-DRALIDN 348
            G  S  V   +                 ++  G+ LG L   + +  + +P + ALI  
Sbjct: 305 HGADSRQVCASSDCASCHKHNAARPQAFSISNQGNELGELKAHFVDGHAAQPWETALIQA 364

Query: 349 FALILSRAIYYNQAQRQAEQLLLMEERATIARELHDSLAQSLSYLKIQLTLLKRSVTPLK 408
            A ++  ++   + + Q  +LLL++ER  IARELHDSLAQ+LSY+K+Q++   R  T ++
Sbjct: 365 LANLIGTSLSLKRQREQDHRLLLLDERTIIARELHDSLAQALSYMKLQVS---RMQTLMR 421

Query: 409 SDGDLSKTENIIREIDKGLSDAYTQLRELLTTFRLTLTEGSFGQSLLGMLTQLSGQTDAK 468
               +   E +  E+ +GL++AY QLRELLTTFRL + +    + L     + S + D K
Sbjct: 422 RGEPVQTLETVTGELREGLNNAYRQLRELLTTFRLQIHDDGLVEELKDTAEEFSNRGDFK 481

Query: 469 IELNNALSSIALDAHQQVHLVQLIREATINAIKHAKATKIKVNCQEQQGRVQVTIEDDGV 528
           + L     +  L A +Q+H++Q+ REA  N ++HA A    +  +++   V+++IEDDG 
Sbjct: 482 VHLFVDTLAFELSASEQIHILQITREALSNCLRHAHAENAWLELRQEGETVRLSIEDDGR 541

Query: 529 GFDLQDHKINHYGMSIMQERAARLRGELKVESAPGKGCKVVLTYQ 573
           GF  +  +  H+G++IM ERA  LRG+L++ S   +G ++ + +Q
Sbjct: 542 GFSGEVDQREHHGLNIMNERARSLRGQLQIHSRTPQGTRIQVHFQ 586