Pairwise Alignments

Query, 583 a.a., nitrate/nitrite two-component system sensor histidine kinase NarQ from Vibrio cholerae E7946 ATCC 55056

Subject, 805 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 70.9 bits (172), Expect = 2e-16
 Identities = 47/197 (23%), Positives = 99/197 (50%), Gaps = 6/197 (3%)

Query: 373 EERATIARELHDSLAQSLSYLKIQLTLLKRSVTPLKSDGDLSKTENIIREIDKGLSDAYT 432
           EE+A IARE+HD L Q L+ LK++ ++ +     L  D  L++    ++ +   ++  + 
Sbjct: 592 EEKAHIAREVHDELGQVLTVLKLETSMCELGFADL--DPALAQRLESMKRL---IAQLFQ 646

Query: 433 QLRELLTTFRLTLTEGSFGQSLLGMLTQLSGQTDAKIELNNALSSIALDAHQQVHLVQLI 492
           ++R++ T  R  + +     ++     +   ++     +       AL   + + L +++
Sbjct: 647 RVRDVATALRPPILDAGIASAVEWQARRFEERSGVACLVEVPECPPALGNAKAIGLFRIL 706

Query: 493 REATINAIKHAKATKIKVNCQEQQGRVQVTIEDDGVGF-DLQDHKINHYGMSIMQERAAR 551
           +E+  N ++HA+A  + V  Q +   + + + DDG GF D      + +G+  M+ER   
Sbjct: 707 QESLTNVMRHARAQTVSVQLQLEGDLLCLRVSDDGCGFADAGRSAGSSFGLVGMRERIQM 766

Query: 552 LRGELKVESAPGKGCKV 568
           L G+L ++S PG+G  +
Sbjct: 767 LGGQLCIDSQPGEGTTI 783