Pairwise Alignments

Query, 583 a.a., nitrate/nitrite two-component system sensor histidine kinase NarQ from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., Signal transduction histidine kinase, nitrate/nitrite-specific from Pseudomonas stutzeri RCH2

 Score =  246 bits (627), Expect = 3e-69
 Identities = 185/594 (31%), Positives = 299/594 (50%), Gaps = 40/594 (6%)

Query: 15  RHSLTRTMAKAMLLILFLSALTTGVAIVTLASSLN-DAEAVNVSGSMRMQSYRLAYDIQT 73
           RHS+      A ++I+  S ++  +A + LA +L  DAEA+N +GS+RMQ+YRLA+  + 
Sbjct: 40  RHSIVFNTLVAFVVIIGFSLISM-LASLYLADALEGDAEAINQAGSLRMQAYRLAFTAEH 98

Query: 74  QSHDYKAH-IFLFENSLYSPSMLALLDWTVPSDIQQDYYQLIERWHELKKVLNSDQKAQ- 131
              D  A  I   E +L S S+ + L     + +   +  +++ W E  + L   Q AQ 
Sbjct: 99  GPQDLLAERIETLERTLRSASLRSALHRHGDTPLPGLHAGVMQHWQERMRPLLDAQPAQL 158

Query: 132 --YLDQVAPFVSLVDGFVLKLQRFSERKLIALAAVGSFGLGGIFAVSLFVVYYIREQVVR 189
             Y  +   FVS +D FV  LQ  SE KL  + A+ +  L  I  ++  ++Y +   +  
Sbjct: 159 DDYRQEAPEFVSELDVFVRTLQEASEGKLGVIRALQAGTLFVIVLIAFVLIYGLHNNLAS 218

Query: 190 PLNAMVDASEKIKNRNFDVMLEETSSTEMGILSRTFNSMAGDLGKLYRGLEHAVNEKTNK 249
           PL ++   +  I   +F   ++    TE+ +L+RT N M+ +L  LY  +E  V++KT  
Sbjct: 219 PLRSLTRMARDIGKGDFSGQVQIPGDTELSLLARTLNQMSQELAGLYAEMEQKVDDKTAA 278

Query: 250 LQMANQSLQVLYHSSQELTASRITASNFQTILRHWVAL---EGICALRLEIEEEAGKP-- 304
           L  +N +LQ+L++S++ L +     S     L   V      G  +L L    E G    
Sbjct: 279 LTRSNATLQLLFNSARMLYSQPDDPSQMMGSLLAKVQQILGTGPISLCLNRTAETGSHTA 338

Query: 305 --------------------LILQEGK-PSGAVMLQTPLTLDGHHLGFLYWEAGSPEP-- 341
                               L+ Q G+ PSG  ++   L      LG L       +P  
Sbjct: 339 MTSNDLQPPDYCKLPQCDVCLVNQTGRLPSGEELVTFELRSGQDDLGSLRVAHPEGQPLE 398

Query: 342 --DRALIDNFALILSRAIYYNQAQRQAEQLLLMEERATIARELHDSLAQSLSYLKIQLTL 399
                L+   A + + ++   Q  ++  +L LMEERA IARELHDSLAQ+LS  K+QL  
Sbjct: 399 SWQTLLLTTLADLFAASLSLAQLGQKQARLALMEERAVIARELHDSLAQALSAQKLQLAR 458

Query: 400 LKRSVTPLKSDGDLSKTENIIREIDKGLSDAYTQLRELLTTFRLTLTEGSFGQSLLGMLT 459
           LKR    ++ D   ++ ++ +++ID+GL+ AY QLRELLTTFR+ + E     +L   + 
Sbjct: 459 LKRL---MQKDSGQAQLDDSVQQIDRGLNSAYRQLRELLTTFRIKVNEPGLKPALQATVE 515

Query: 460 QLSGQTDAKIELNNALSSIALDAHQQVHLVQLIREATINAIKHAKATKIKVN-CQEQQGR 518
           +    +  +I  +  L    L  +++VH +Q+IREA  N +KHA+A    +   Q++ G 
Sbjct: 516 EFGANSGLQIINDYHLDHCPLTPNEEVHCLQIIREALSNVVKHAEADHCWLKLTQDEIGT 575

Query: 519 VQVTIEDDGVGFDLQDHKINHYGMSIMQERAARLRGELKVESAPGKGCKVVLTY 572
           + V IEDDG+G   ++ +  HYG+ I++ERA  L G + +   PG G  V L +
Sbjct: 576 IHVKIEDDGIGISPEEQRAGHYGLIILRERANSLNGNISIGLRPGGGTSVHLRF 629