Pairwise Alignments

Query, 583 a.a., nitrate/nitrite two-component system sensor histidine kinase NarQ from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., nitrate/nitrite sensor protein NarQ (RefSeq) from Shewanella amazonensis SB2B

 Score =  355 bits (912), Expect = e-102
 Identities = 213/571 (37%), Positives = 325/571 (56%), Gaps = 8/571 (1%)

Query: 15  RHSLTRTMAKAMLLILFLSALTTGVAIVTLASSLNDAEAVNVSGSMRMQSYRLAYDIQTQ 74
           R SLT  +   M++++ LS+  +  A+  L+ SL DA A+N SGS+RMQSYRL +   + 
Sbjct: 3   RGSLTSKILGLMMVLILLSSGLSIFALANLSYSLGDARAINASGSLRMQSYRLMFYANSG 62

Query: 75  SHDYKAHIFLFENSLYSPSMLALLDWTVPSDIQQDYYQLIERWHELKKVLNSDQKAQYLD 134
           S + +  I  FE +LYSP++   L+W+ P  ++  Y  +I++W  +K  +  +    Y  
Sbjct: 63  SEEAEDKIREFEATLYSPALKNSLNWSTPQRLKDQYLLVIDKWKVMKYFIEEENSRLYAS 122

Query: 135 QVAPFVSLVDGFVLKLQRFSERKLIALAAVGSFGLGGIFAVSLFVVYYIREQVVRPLNAM 194
            +  FV  +D FVL+ +  +  KL  LAA    GLG + A++L  V Y + +VV PLN +
Sbjct: 123 SLKDFVDTIDLFVLETEHHAAFKLKLLAASQLLGLGMMLAIALVAVRYTKRKVVEPLNQL 182

Query: 195 VDASEKIKNRNFDVMLEETSSTEMGILSRTFNSMAGDLGKLYRGLEHAVNEKTNKLQMAN 254
           + ++  I   NFDV + +T   E+  L+   +S A +L  LY  LE  V EKT  L  AN
Sbjct: 183 MLSANTISKGNFDVDMPQTEYIELQALADALDSTAKELSALYGDLESQVQEKTLALTRAN 242

Query: 255 QSLQVLYHSSQELTASRITASNFQTILRHWVALEGICALRLEIEEEAG--KPLILQEGKP 312
           Q L  LY +   L    +     +  L      E +  LRL I++E    + +  + G P
Sbjct: 243 QELNFLYDNLVMLHGKTLDYRALKAALDQLKQYEQLDYLRLIIQDEGDIEEAIEAEGGWP 302

Query: 313 SG-AVMLQTPLTLDGHHLGFLYWEAGSPEPDRALIDNFALILSRAIYYNQAQRQAEQLLL 371
           +      + PLT +   LG+L        P+R L +NFA++L+R+I  +Q+  Q +QL L
Sbjct: 303 AEIEASCRFPLTFEHTDLGYLEM-VSDKAPNRPLFENFAIMLARSILIHQSAEQRQQLAL 361

Query: 372 MEERATIARELHDSLAQSLSYLKIQLTLLKRSVTPLKSDGDLSKTENIIREIDKGLSDAY 431
           MEER  IARELHDSL Q LS+LKIQ+TLL++    L       + E  + EI++G+S AY
Sbjct: 362 MEERGVIARELHDSLGQVLSFLKIQITLLRKG---LDDSCRNPEVEQQLNEINEGVSTAY 418

Query: 432 TQLRELLTTFRLTLTEGSFGQSLLGMLTQLSGQTDAKIELNNALSSIALDAHQQVHLVQL 491
            QLRELL+TFRLT+ E +   +L  ML QL  QT  K+ L+  +    L A+Q +H++QL
Sbjct: 419 VQLRELLSTFRLTIKEPNLKHALEAMLEQLRSQTHTKLTLDYGIREQLLGANQHIHILQL 478

Query: 492 IREATINAIKHAKATKIKVNC-QEQQGRVQVTIEDDGVGFDLQDHKINHYGMSIMQERAA 550
            REAT+NAIKHA A++I + C +  +G + +++ DDGVG +    +  H+G+ IM ERA+
Sbjct: 479 TREATLNAIKHANASEIVIQCAKNNEGMINISVSDDGVGIEHLKERDQHFGIGIMHERAS 538

Query: 551 RLRGELKVESAPGKGCKVVLTYQQSEEKNKN 581
           +L G+L+  S    G  V LT    +E +++
Sbjct: 539 KLEGQLRFSSNEAGGTTVTLTLPPHQESSQH 569