Pairwise Alignments

Query, 583 a.a., nitrate/nitrite two-component system sensor histidine kinase NarQ from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., nitrate/nitrite sensor protein NarQ (RefSeq) from Shewanella sp. ANA-3

 Score =  325 bits (832), Expect = 4e-93
 Identities = 200/550 (36%), Positives = 305/550 (55%), Gaps = 8/550 (1%)

Query: 15  RHSLTRTMAKAMLLILFLSALTTGVAIVTLASSLNDAEAVNVSGSMRMQSYRLAYDIQTQ 74
           R SLT  +   ML+++ LS+     AI+ L+ SL DA+A+N SGS+RMQSYRL +   + 
Sbjct: 3   RGSLTSKILGLMLVLILLSSSLAIFAIINLSYSLGDAKAINASGSLRMQSYRLMFYANSG 62

Query: 75  SHDYKAHIFLFENSLYSPSMLALLDWTVPSDIQQDYYQLIERWHELKKVLNSDQKAQYLD 134
           S   +  I  FEN+L+S ++     W  P  I   Y  +I++W  +K  +  +    Y  
Sbjct: 63  SDAAQEKIAEFENTLHSEALQPSTGWLSPKKIADQYQLVIDKWLVMKYYIEQENSRDYAA 122

Query: 135 QVAPFVSLVDGFVLKLQRFSERKLIALAAVGSFGLGGIFAVSLFVVYYIREQVVRPLNAM 194
            +  FV  +D  VL+++  +  KL  LAA   FGLG + A++   V + + +VV PL  +
Sbjct: 123 SLKDFVDTIDLLVLEMEHHAAFKLRLLAASQIFGLGLMLAIAFLAVRFTKRKVVVPLQQL 182

Query: 195 VDASEKIKNRNFDVMLEETSSTEMGILSRTFNSMAGDLGKLYRGLEHAVNEKTNKLQMAN 254
           ++++  I   NF++ + ET   E+  L+      A +L  LY  LE  V EKT  L  AN
Sbjct: 183 MESANTISKGNFEIEMPETEYIELTALTHALQKTARELATLYGNLESQVAEKTLALTRAN 242

Query: 255 QSLQVLYHSSQELTASRITASNFQTILRHWVALEGICALRLEIE--EEAGKPLILQEGKP 312
             L  LY +   L A+++     +  L      E I  LRL I+  E+  + +    G P
Sbjct: 243 NELAFLYDNLLTLNANKLDYKALRAALNQLKDYESIDYLRLIIQYPEQELEVVEADGGWP 302

Query: 313 SGAV-MLQTPLTLDGHHLGFLYWEAGSPEPDRALIDNFALILSRAIYYNQAQRQAEQLLL 371
                  + PL  +   LG+L     + + +  L  NFA++L+R+I  + A  Q +QL L
Sbjct: 303 EDTQNSTRFPLQFEQADLGYLEL-ISAQDTNTPLFKNFAIMLTRSIVIHNATEQRQQLAL 361

Query: 372 MEERATIARELHDSLAQSLSYLKIQLTLLKRSVTPLKSDGDLSKTENIIREIDKGLSDAY 431
           MEER  IARELHDSL Q LS+LKIQ++LL+++   L         E  + EI++G+S AY
Sbjct: 362 MEERGVIARELHDSLGQVLSFLKIQISLLRKN---LDHSCRSPAIEGQLTEINEGVSTAY 418

Query: 432 TQLRELLTTFRLTLTEGSFGQSLLGMLTQLSGQTDAKIELNNALSSIALDAHQQVHLVQL 491
            QLRELL+TFRLT+ E +   ++  ML QL   TD KI L+  LS   L+A Q +H++Q+
Sbjct: 419 VQLRELLSTFRLTIKEPNLKNAMEAMLEQLRANTDIKIHLDYKLSPQWLEAKQHIHILQI 478

Query: 492 IREATINAIKHAKATKIKVNC-QEQQGRVQVTIEDDGVGFDLQDHKINHYGMSIMQERAA 550
            REAT+NAIKHA A++I + C ++  G V +++ D+G+G      +  H+G+ IM ERA+
Sbjct: 479 TREATLNAIKHANASQINIRCYKDDNGMVNISVSDNGIGIGYLKERDQHFGIGIMHERAS 538

Query: 551 RLRGELKVES 560
           +L G +   S
Sbjct: 539 KLAGTVVFSS 548