Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., Nitrate/nitrite response regulator protein from Pseudomonas fluorescens FW300-N2E2

 Score =  165 bits (417), Expect = 7e-46
 Identities = 90/207 (43%), Positives = 130/207 (62%), Gaps = 4/207 (1%)

Query: 5   VLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSGL 64
           +LLVDDHP+MRRGI Q+L  E++ ++V EA  G EA+ L   L+PDL+LLD NM  M+G+
Sbjct: 9   LLLVDDHPMMRRGIRQMLELEDDLQIVGEASHGEEALTLIEPLKPDLVLLDNNMPQMNGI 68

Query: 65  DTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGEK 124
           +TL  LR       V++ TVSD+  DI   ++  A+GYLLKD EP+ L+  ++ A+ G  
Sbjct: 69  ETLRRLRAMHYTGKVLLFTVSDAEDDIRDALRLDANGYLLKDMEPELLIQYIRDALNGAL 128

Query: 125 AFSESVERYLLNREHTSNPFEA---LTEREMQIMSEVAKGYRNRQIADRLFISESTVKVH 181
             S  + R ++ +   S P +A   LTERE Q++  +A GY N+ I  +L I+E TVKVH
Sbjct: 129 VISPGLTR-VMAQALRSPPRQADVELTERERQVLKTIAGGYSNKVIGHKLGITEGTVKVH 187

Query: 182 MKSLLKKLDVPSRTAATILYLERYANA 208
           +K+LL KL + SR  A +  +E    A
Sbjct: 188 VKNLLHKLGLRSRVEAAVWAMEHLRGA 214