Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., DNA-binding response regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

 Score =  117 bits (293), Expect = 2e-31
 Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 9/210 (4%)

Query: 3   CRVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMS 62
           C +LLVDDH L+R G+  L+     + V+ EA  G   + L   L PD++LLD++MK   
Sbjct: 3   CNLLLVDDHSLIRAGVRALVMDIPGYAVIGEASDGTRLVELVERLNPDIVLLDISMKDTC 62

Query: 63  GLDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQG 122
           GLD L  L+     + V+IL++    A I   +++GA GYLLKDT  ++L   L+     
Sbjct: 63  GLDALQQLKRVRPHSKVLILSMHTDPALIMQALESGAHGYLLKDTTANELKHALEALRNN 122

Query: 123 EKAFSESVERYLLN------REHTSNPFEA--LTEREMQIMSEVAKGYRNRQIADRLFIS 174
           E+  S ++   ++N      ++H S+P     LT R+++I+  + +G   R+IA+ L +S
Sbjct: 123 ERYLSPAIAHTVINQALTRVQKHQSDPARTHNLTARQLEILRLIVRGKSTREIANGLNLS 182

Query: 175 ESTVKVHMKSLLKKLDVPSRTAATILYLER 204
             TV+ H   ++K+L +    A  +L+  R
Sbjct: 183 IKTVETHRAQIMKRLQIHD-VAGLVLFAVR 211