Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., Two-component response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  139 bits (350), Expect = 4e-38
 Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSG 63
           R+LL DDH + R G   +L+    FEVV +A  G EA+ L   LQPD+ +LD+ M  ++G
Sbjct: 6   RLLLADDHEVTRTGFISMLAGNPGFEVVGQARDGQEALDLCERLQPDIAILDIRMPVLNG 65

Query: 64  LDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGE 123
           L     L+  +    VVI T+ DS   +EA + AGA GYLLKD   D+++  LK+  QGE
Sbjct: 66  LGAARILQQRQPGIKVVIFTMDDSPDHLEAAIGAGAVGYLLKDASRDEVLDALKRVAQGE 125

Query: 124 KAFSESVERYLLNR-----EHTSNPFEALTEREMQIMSEVAKGYRNRQIADRLFISESTV 178
           +A + SV   LL R      + +   +ALT RE Q++  VA G+ NR+I ++L I+  T 
Sbjct: 126 EALNSSVSARLLRRMAERGANGATQVQALTARERQVLGLVAGGFSNREIGEKLGIAPGTA 185

Query: 179 KVHMKSLLKKLDVPSRTAATI 199
           K H++ ++ KL    RT A +
Sbjct: 186 KAHVERVIGKLGAADRTQAAV 206