Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  159 bits (401), Expect = 4e-44
 Identities = 85/202 (42%), Positives = 127/202 (62%), Gaps = 6/202 (2%)

Query: 13  LMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSGLDTLTALRT 72
           +MRRG+  LL  E++ E++ EAG+G EAI LA +++PDLIL+DLNM G+ GL+T   +R 
Sbjct: 1   MMRRGLRDLLELEDDLELIGEAGNGEEAIRLALEIEPDLILMDLNMPGIDGLETTRRMRD 60

Query: 73  DECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGEKAFSESVER 132
            + DA +V+ TVSD  + +   ++ GADGYLLKD + +QL+  ++ A  G  A S  + +
Sbjct: 61  ADIDARIVMFTVSDEQSHVLEALRNGADGYLLKDMDAEQLIEQIRIAATGRMALSPELTQ 120

Query: 133 YLLN------REHTSNPFEALTEREMQIMSEVAKGYRNRQIADRLFISESTVKVHMKSLL 186
            L        +      F +LT+RE +++  +AKG  N+ IA +L I+E TVKVH+K+LL
Sbjct: 121 VLAEAIRVRPKPSGQVQFSSLTKREKEVLRLIAKGQSNKMIARKLGITEGTVKVHVKNLL 180

Query: 187 KKLDVPSRTAATILYLERYANA 208
            KL + SR  A +  LE  A A
Sbjct: 181 HKLGLRSRVEAAVWVLENEAKA 202