Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  114 bits (285), Expect = 1e-30
 Identities = 63/201 (31%), Positives = 113/201 (56%), Gaps = 4/201 (1%)

Query: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSG 63
           RVL+VDDH L+R GI+++L+     +V+ +A SG +AI  A +L+PD++L+D+ M G+ G
Sbjct: 3   RVLVVDDHDLVRTGISRMLADISGLQVIGQADSGEDAIRKARELKPDVVLMDVKMPGIGG 62

Query: 64  LDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGE 123
           L+    L     D  V+ +T+ +       L++AGA GYL K    +++V  ++    G+
Sbjct: 63  LEATRKLLRSYPDLKVIAVTICEEDPFPTRLLQAGAAGYLTKGAGLEEMVQAIRMVFGGQ 122

Query: 124 KAFSESVERYL----LNREHTSNPFEALTEREMQIMSEVAKGYRNRQIADRLFISESTVK 179
           +  S  + + L       + + +PF+ L+ERE+QI   +A   + + I+D+L +S  TV 
Sbjct: 123 RYISPQIAQQLALKSFQPQLSESPFDLLSEREIQIALMIANCQKVQSISDKLCLSPKTVN 182

Query: 180 VHMKSLLKKLDVPSRTAATIL 200
            +   + +KL + S     +L
Sbjct: 183 TYRYRIFEKLSITSDVELALL 203