Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  112 bits (279), Expect = 7e-30
 Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 4/204 (1%)

Query: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSG 63
           ++LLVDDH ++R+G   LL        V+EA SG +A+       P L++LDL + G+SG
Sbjct: 2   KILLVDDHAVVRQGYASLLKALLPEVTVSEAASGEQALEQVQQSIPSLVVLDLGLPGISG 61

Query: 64  LDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGE 123
           L+T   LR       V+I ++ D  A +   + AGA GYL K   PD LV  +++ + G+
Sbjct: 62  LETCRRLRQRLPLMPVLIFSMHDELALVRQALDAGASGYLTKRCAPDVLVEAVRKVLAGQ 121

Query: 124 KAFSESVERYLLNREHTSNPFEA----LTEREMQIMSEVAKGYRNRQIADRLFISESTVK 179
               + +   L  +  + +P +     +T REM+I   +A+G  NR+IA+RL IS  TV 
Sbjct: 122 TFIEQPLATDLACQRPSHSPAKGRLAEMTPREMEIFIMLARGIGNREIAERLCISSKTVS 181

Query: 180 VHMKSLLKKLDVPSRTAATILYLE 203
            HM  L  KL V S+     L ++
Sbjct: 182 NHMALLKSKLGVSSQAELVHLAID 205