Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., response regulator transcription factor from Synechocystis sp000284455 PCC 6803

 Score =  118 bits (295), Expect = 9e-32
 Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 13/209 (6%)

Query: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSG 63
           R+ L++D  L+R+G+   L+ E  FE V EA +G   + +    +PD++++D+ +  M+G
Sbjct: 5   RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64

Query: 64  LDTLTALRTD--ECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQ 121
           +D    L+     C   VVILT++D    + A   AGAD Y +KD+  + L+  ++    
Sbjct: 65  IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQATHG 124

Query: 122 GEKAFSESVERYLLNREHTSNPFE-----------ALTEREMQIMSEVAKGYRNRQIADR 170
           G      ++ R +L     + P E            LTERE++++  +  G  N  IA++
Sbjct: 125 GFAWIDPAIARIVLAHAPGAEPSEPSSPSRTSLSYGLTERELEVLQLIVDGCSNADIAEK 184

Query: 171 LFISESTVKVHMKSLLKKLDVPSRTAATI 199
           L+I+  TVK H++++L KL    RT A +
Sbjct: 185 LYITVGTVKTHVRNILNKLCANDRTQAAV 213