Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., response regulator transcription factor from Synechocystis sp000284455 PCC 6803

 Score =  113 bits (283), Expect = 2e-30
 Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 12/215 (5%)

Query: 2   SCRVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGM 61
           S R+LLV+D  L R G+   LS E   +V  EA  G  AIA  +    D+++LD+ + G+
Sbjct: 7   SIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGI 66

Query: 62  SGLDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQ 121
            G++    ++       V+ILT     A I  L++A A GY +K    + LV  ++    
Sbjct: 67  GGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVAA 126

Query: 122 G------------EKAFSESVERYLLNREHTSNPFEALTEREMQIMSEVAKGYRNRQIAD 169
           G            + AF  S     +     ++    LT+RE++I+S VAKG  N++IAD
Sbjct: 127 GAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKSNQEIAD 186

Query: 170 RLFISESTVKVHMKSLLKKLDVPSRTAATILYLER 204
            L+I+  TV+VH+ ++L+KL+V  RT A +L +ER
Sbjct: 187 ELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIER 221