Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., two-component response regulator protein from Sinorhizobium meliloti 1021

 Score =  137 bits (346), Expect = 1e-37
 Identities = 80/203 (39%), Positives = 120/203 (59%), Gaps = 7/203 (3%)

Query: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSG 63
           RV +VDDHPL R G+ + LS  + FE+VAE GS  EA+A+A  L PD++LLD++M G  G
Sbjct: 6   RVAVVDDHPLFREGVTRSLSEIDGFEIVAEGGSRDEAVAIAQSLNPDVMLLDISMPG-GG 64

Query: 64  LDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGE 123
           L+ + A+ +      +V+LTVS++  D+ A +K GA GY+LK      L  +++    GE
Sbjct: 65  LNAVPAILSVAPSQKIVMLTVSEANDDVAAALKEGAKGYILKGIGARALAEVIRTVASGE 124

Query: 124 KAFSESVERYLLNRE------HTSNPFEALTEREMQIMSEVAKGYRNRQIADRLFISEST 177
              + ++   LL  +        SN    LT RE +++  VA G  N+QIA +L + E T
Sbjct: 125 SYVAPTLSAKLLTGQLANSAPAKSNLVAELTRREQEVLHLVASGMSNKQIARKLDLHEKT 184

Query: 178 VKVHMKSLLKKLDVPSRTAATIL 200
           VK HM  ++ KLDV +RT A ++
Sbjct: 185 VKHHMTQIMAKLDVANRTEAAMV 207